MidgeBase gene description page [Pn.01675]
Outline
| Gene ID | Pn.01675 |
| Type | Protein coding gene |
| Scaffold | PnScaf1507 |
| Start | 54935 |
| End | 56550 |
| Direction | - |
Sequence
Transcript: 1488 (bp)
ATGATTCTCTTCACTATTTTAATAGTTTTTATTGTCTCGGTAATATTGTGGTACAAGAAAAAGTATGGACGTCGTGATTATTTGTGCGAATTGATTCCGCACCCAAGAAAGCTGCCACTGATCCACAATTGCCTCAAATTTCTCGGCAAAACTCCAAAATATTTCTTCGAATGGATGGAGGATAAGTACAGAGAACTTGGTCGGGTTTATCACTTTTCGACGGGGACTTTTGGATCCAGTTTTGCTGTGGTGGCTGACGTTAAAGTTGCTGAGGCACTTCTTTCGAGTCAAACGCAAATAGACAAGACAGTTGATTACGATTATCTTATTCCATGGATTGGAACAGGACTTCTGATATCCAGTGGTAAAAAATGGTTCCAACGCCGAAAGCTGCTAACGCCTGGCTTCCACTTCAGTATTCTCGAGAAATTTGTTGAAATCATGAGTGAGCAAGCAAATGTCTTTGTGGACATCTTGAGCAAACATGATGGAAGTGAAGTTGATATATTTCCGCTAACAAACTTGTATGCGCTGGACACAATTTGCGAAGCGGCAATGGGAATAAATATTCAAGCTCAAACAAGAAAATCCGAATACGTTGATGCCGTTCAAGAAATTACTGAAATTATCACGTACAGATCGTTTGAGCCGACGATGCAAGTAAACTTTTTGTATCGCCTTTCAAAGCTCTATAAACGAGAAAAGGAATTGATAAAAACTCTACACAGCTTTACCGACAAAATTATTCAAACTCGAAGAGAAGAATTACTTAGCAACAATGCAATGTCGGAAGAAGACGATGATGTGGGGAAGAAGAAGAAGAAAGCACTGCTCGATATTCTGCTGAGTTCAACGATTGATGGTCAGCCACTTTCGAACTTGGGCATAAGAGAAGAAGTCGACACATTCATGTTTGCTGGCCATGACACCACAAAAAGCGGCATAAGTTTTGTGTTTTACTGCATCGCCAAATATCCTGATGTTCAACAGAAGGTCTACGAGGAGGTCATGAGTGTTTTAGGCGACAGCGATGAGGTTACAATACGGAAGGTCAATGAACTACACTACCTTGAACTTGTGATCAGAGAAGCTCTCCGGATGTTTCCTCCCGTTCCATATTACGGTCGTCAACTTTCCGAGGAACTTGTCACCGAGAACTACACTTTTCCGAAGGGCATGAACTTGTATGTGTCGCCATACTTGATGGGATTGAACGAGGACGTGTTTCCCGATCCCAAAAGATTTGACCCTCATCGCTTCGAGATTGAAAAGGCCAACGACAAGATCAATCCCTTCTCCTACGTGCCCTTTTCGGCCGGTCCGCGAAATTGCATCGGTCAGAGGTTTGCACAATACGAGATGAGAACAATTGTCGCCAAAGTTATCAAAAACTTCAAACTCACTGTGGTCGATGAAGATTTGCAAATTTTAGTCGAAATCGTATTAAAACCCGAAACGGGAATCTATTTACAAGTTCAAAAGCGAAAA
Protein: 496 (aa)
MILFTILIVFIVSVILWYKKKYGRRDYLCELIPHPRKLPLIHNCLKFLGKTPKYFFEWMEDKYRELGRVYHFSTGTFGSSFAVVADVKVAEALLSSQTQIDKTVDYDYLIPWIGTGLLISSGKKWFQRRKLLTPGFHFSILEKFVEIMSEQANVFVDILSKHDGSEVDIFPLTNLYALDTICEAAMGINIQAQTRKSEYVDAVQEITEIITYRSFEPTMQVNFLYRLSKLYKREKELIKTLHSFTDKIIQTRREELLSNNAMSEEDDDVGKKKKKALLDILLSSTIDGQPLSNLGIREEVDTFMFAGHDTTKSGISFVFYCIAKYPDVQQKVYEEVMSVLGDSDEVTIRKVNELHYLELVIREALRMFPPVPYYGRQLSEELVTENYTFPKGMNLYVSPYLMGLNEDVFPDPKRFDPHRFEIEKANDKINPFSYVPFSAGPRNCIGQRFAQYEMRTIVAKVIKNFKLTVVDEDLQILVEIVLKPETGIYLQVQKRK
| Type | Start | End | Length |
| CDS |
54938 |
55811 |
874 |
| CDS |
55873 |
55939 |
67 |
| CDS |
56004 |
56550 |
547 |
| intron |
55812 |
55872 |
61 |
| intron |
55940 |
56003 |
64 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001851423 |
cytochrome P450 [Culex quinquefasciatus] gb|EDS33498.1| cytochrome P450 [Culex quinquefasciatus] |
1e-127 |
| InterPro |
IPR001128 |
Cytochrome P450 |
|
| InterPro |
IPR002401 |
Cytochrome P450, E-class, group I |
|
| InterPro |
IPR017972 |
Cytochrome P450, conserved site |
|
| Gene Ontology(BP) |
GO:0055114 |
oxidation-reduction process |
|
| Gene Ontology(MF) |
GO:0009055 |
electron carrier activity |
|
| Gene Ontology(MF) |
GO:0020037 |
heme binding |
|
| Gene Ontology(MF) |
GO:0016705 |
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
|
| Gene Ontology(MF) |
GO:0005506 |
iron ion binding |
|
| Pfam |
PF00067.17 |
Cytochrome P450 |
5e-109 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| T. castaneum |
TC003369 |
| M. musculus |
ENSMUSG00000066072 |
| M. musculus |
ENSMUSG00000028713 |
| M. musculus |
ENSMUSG00000028715 |
| H. sapiens |
ENSP00000400413 |
| T. castaneum |
TC003368 |
| H. sapiens |
ENSP00000360991 |
| H. sapiens |
ENSP00000445965 |
| P. vanderplanki |
Pv.00336 |
| H. sapiens |
ENSP00000360987 |
| H. sapiens |
ENSP00000360958 |
| H. sapiens |
ENSP00000360971 |
| M. musculus |
ENSMUSG00000063929 |
| H. sapiens |
ENSP00000271153 |
| H. sapiens |
ENSP00000360968 |
| H. sapiens |
ENSP00000294337 |
| P. humanus |
PHUM019500-PA |
| M. musculus |
ENSMUSG00000047155 |
| H. sapiens |
ENSP00000360972 |
| M. musculus |
ENSMUSG00000066071 |
| H. sapiens |
ENSP00000334246 |
| H. sapiens |
ENSP00000311095 |
| M. musculus |
ENSMUSG00000028712 |
| M. musculus |
ENSMUSG00000078597 |
| D. melanogaster |
FBgn0030615 |