MidgeBase gene description page [Pn.01608]
Outline
| Gene ID | Pn.01608 |
| Type | Protein coding gene |
| Scaffold | PnScaf1462 |
| Start | 18183 |
| End | 18660 |
| Direction | + |
Sequence
Transcript: 405 (bp)
ATGTGCACGCGCAACCTCCAGAAACTAGCGCGCAACCAGAGCTTTGCCCAAGAGTGCTTAAAGTTCGTGACAATGAGCGAGGATGAACCGTTTCCCTCGATGTACAGCGTTTTTCAGCTCTATTCGCAAATGACACACGGAGTGAACCTAAAAACACTCTGCATAAGGCTGTCGCCGAGAAGCAACAACATCAACGAGCGAAAGTTGGTCGAATTCGGCCTGCGGCACAAACTCATTCGCCTCATAAACAAATATCCGGTCTTCACCGGCTCAATTCCCAACGTTCGACAGCGTCTCTACAACGGTCTCAATCACTTCGACGAAATTTGCTGCGCCACAGGATTAACGTCTCAAAAACTCGAAGAATTGATCGACGCCGACACGAATGTGACTGTTCTCATGAAA
Protein: 135 (aa)
MCTRNLQKLARNQSFAQECLKFVTMSEDEPFPSMYSVFQLYSQMTHGVNLKTLCIRLSPRSNNINERKLVEFGLRHKLIRLINKYPVFTGSIPNVRQRLYNGLNHFDEICCATGLTSQKLEELIDADTNVTVLMK
| Type | Start | End | Length |
| CDS |
18183 |
18299 |
117 |
| CDS |
18370 |
18657 |
288 |
| intron |
18300 |
18369 |
70 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
EFR24301 |
hypothetical protein AND_11201 [Anopheles darlingi] |
2e-44 |
| InterPro |
IPR009348 |
Nitrogen permease regulator 2 |
|
| Pfam |
PF06218.6 |
Nitrogen permease regulator 2 |
4.4e-23 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| B. mori |
BGIBMGA003861-TA |