MidgeBase gene description page [Pn.01592]
Outline
| Gene ID | Pn.01592 |
| Type | Protein coding gene |
| Scaffold | PnScaf1451 |
| Start | 16904 |
| End | 19147 |
| Direction | - |
Sequence
Transcript: 1644 (bp)
ATGAACCTGTCAAAGTTTTGCTGCAAGAGTGTCATTAAGAGCATAGGCTCTTGTGCAGCGGTCAATCAATTACGGCTATTATCATCGAAATCGCTGAAACTTGAGCCGAATGTAGAACAGATTGATGATAACAATGGAAAAGTTACAACGCAAAACGAACAACGTATCACGAAGCAACAAGTTTCGCCGCTGACCGACTCTTTCGGCAGATTTCACTCGTACCTGCGAATATCGCTGACCGAAAAGTGCAACCTACGATGCCAGTACTGCATGCCCGAGCAGGGCGTTCCTCTGACTCCGAAGCCCCACCTGCTGACCACCGACGAAGTCGTCTACATATCGAAGCTCTTCGTCGACCAAGGCGTCCGAAAAATCCGGCTGACGGGCGGCGAGCCGACCATCCGCAAGGACCTCGTCGACATCATCGCGAGCCTGAAGGCAATCCCTCTGCTCGAGAATGTCGGCATCACAACCAACGGGCTGGTTCTCACGCGAAATCTCGTGAAATATCAGCGCGCCGGGCTCGACTCGCTCAACATTTCCCTCGACACGCTCCAGCCGAAGAAGTTCGAAGAGATAACGAGACGAAAGGGCTTCGAGCGCGTCGTTGCCGGCATCGATCTGGCCATTCAACTTGGCTACAAGCCGAAAGTCAACTGCGTCGCGATGAGGAACTTCAACGAGGACGAGATTTGTGATTTTGTCGAGTGGACGCGTGACCGACGAGTGGACATCCGCTTTATCGAGTACATGCCGTTCTCGGGCAATCGCTGGCACACCGAGAAGCTTCTGTCTTTTAGCGACATGCTGAGCTTGATTCGAGAAAAGTACCCGAATTTTGAGGCACTCGAGAACAAGCCAAACGACACGTCGAAGGCCTATCGCGTGCCCGGCTACGAAGGTCAAGTGGGCTTCATCACTTCGATGACTGAGCACTTTTGCGGCTCTTGTAACCGCTTGAGAATCACTGCTGATGGAAACTTGAAGGTGTGTCTGTTCGGCAACAAGGAAGTGTCGTTGAGAGACGCCATCCGCAGCGGCTGCTCCGAGGATGACCTCATAGCTCTGATCGGCGCGTCCGTTTTGAGGAAGAAGAAGCAACATGCAGCAAGCACCTATTTATTATTCAACAACTATCGACAACACCCACTTCGAATGCAAGCCCGAGCCTTTTCAACTGACCTCACGCACGTCGACGAGCAGGGACGAGCGAAAATGGTGAACGTAATTGACAAAGCGCACACGAAGAGAAAGGCTGTCGCTAGCGGCAGCGTCATTGTCGGTCCAGAAATCACTCAATTAATCTCGAAAAATCTAATGAAGAAGGGCGACGTCCTGACGATTGCGCAACTCGCCGGCATCATGGGCGCGAAGCAGACGTCGAACCTCATTCCACTCACGCATCCCATTCCGCTTTCGTCGATCAAAGTCGACGTGAAATTGAACGAAGAGCAGCAGCGCGTGGAGATTTCGTCGGCGATTGAGTGCTTCTGGAACACGGGCATCGAAATTGAGGCGTTAACGGCCGTTAGCATCGCCGCTCTCACCATTTACGACATGTGCAAGGCCGTCAGTCACAACATCACGATAACGGACATCAGGCTTGTGGAGAAGTCGGGTGGAAAAAATTACTTTAAGAGAAGT
Protein: 548 (aa)
MNLSKFCCKSVIKSIGSCAAVNQLRLLSSKSLKLEPNVEQIDDNNGKVTTQNEQRITKQQVSPLTDSFGRFHSYLRISLTEKCNLRCQYCMPEQGVPLTPKPHLLTTDEVVYISKLFVDQGVRKIRLTGGEPTIRKDLVDIIASLKAIPLLENVGITTNGLVLTRNLVKYQRAGLDSLNISLDTLQPKKFEEITRRKGFERVVAGIDLAIQLGYKPKVNCVAMRNFNEDEICDFVEWTRDRRVDIRFIEYMPFSGNRWHTEKLLSFSDMLSLIREKYPNFEALENKPNDTSKAYRVPGYEGQVGFITSMTEHFCGSCNRLRITADGNLKVCLFGNKEVSLRDAIRSGCSEDDLIALIGASVLRKKKQHAASTYLLFNNYRQHPLRMQARAFSTDLTHVDEQGRAKMVNVIDKAHTKRKAVASGSVIVGPEITQLISKNLMKKGDVLTIAQLAGIMGAKQTSNLIPLTHPIPLSSIKVDVKLNEEQQRVEISSAIECFWNTGIEIEALTAVSIAALTIYDMCKAVSHNITITDIRLVEKSGGKNYFKRS
| Type | Start | End | Length |
| CDS |
16907 |
17442 |
536 |
| CDS |
17984 |
18920 |
937 |
| CDS |
18977 |
19147 |
171 |
| intron |
17443 |
17983 |
541 |
| intron |
18921 |
18976 |
56 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001848384 |
molybdopterin cofactor synthesis protein a [Culex quinquefasciatus] gb|EDS28213.1| molybdopterin cofactor synthesis protein a [Culex quinquefasciatus] |
0.0 |
| InterPro |
IPR013785 |
Aldolase-type TIM barrel |
|
| InterPro |
IPR013483 |
Molybdenum cofactor biosynthesis protein A |
|
| InterPro |
IPR007197 |
Radical SAM |
|
| InterPro |
IPR023045 |
Molybdenum cofactor biosynthesis C |
|
| InterPro |
IPR010505 |
Molybdenum cofactor synthesis C-terminal |
|
| InterPro |
IPR002820 |
Molybdopterin cofactor biosynthesis C (MoaC) domain |
|
| InterPro |
IPR006638 |
Elongator protein 3/MiaB/NifB |
|
| InterPro |
IPR000385 |
MoaA/nifB/pqqE, iron-sulphur binding, conserved site |
|
| Gene Ontology(BP) |
GO:0006777 |
Mo-molybdopterin cofactor biosynthetic process |
|
| Gene Ontology(CC) |
GO:0019008 |
molybdopterin synthase complex |
|
| Gene Ontology(MF) |
GO:0046872 |
metal ion binding |
|
| Gene Ontology(MF) |
GO:0051539 |
4 iron, 4 sulfur cluster binding |
|
| Gene Ontology(MF) |
GO:0003824 |
catalytic activity |
|
| Gene Ontology(MF) |
GO:0051536 |
iron-sulfur cluster binding |
|
| Pfam |
PF06463.8 |
Molybdenum Cofactor Synthesis C |
7.6e-38 |
| Pfam |
PF13353.1 |
4Fe-4S single cluster domain |
5.1e-06 |
| Pfam |
PF13394.1 |
4Fe-4S single cluster domain |
4.7e-06 |
| Pfam |
PF04055.16 |
Radical SAM superfamily |
1.7e-25 |
| Pfam |
PF01967.16 |
MoaC family |
8.5e-51 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| B. mori |
BGIBMGA009187-TA |
| M. musculus |
ENSMUSG00000064120 |
| P. vanderplanki |
Pv.12038 |
| H. sapiens |
ENSP00000344794 |
| H. sapiens |
ENSP00000410809 |
| C. quinquefasciatus |
CPIJ006606 |
| P. humanus |
PHUM338330-PA |
| H. sapiens |
ENSP00000362282 |
| H. sapiens |
ENSP00000416478 |
| D. plexippus |
DPOGS203140PA |
| A. mellifera |
GB11214-PA |
| A. aegypti |
AAEL000126 |
| N. vitripennis |
NV16619-PA |
| H. sapiens |
ENSP00000309843 |
| A. gambiae |
AGAP006072 |
| T. castaneum |
TC000610 |
| H. sapiens |
ENSP00000362270 |
| H. sapiens |
ENSP00000362284 |
| H. sapiens |
ENSP00000362291 |
| H. melpomene |
HMEL003241-PA |
| H. sapiens |
ENSP00000362277 |
| D. melanogaster |
FBgn0263241 |