MidgeBase gene description page [Pn.01590]
Outline
| Gene ID | Pn.01590 |
| Type | Protein coding gene |
| Scaffold | PnScaf1451 |
| Start | 14374 |
| End | 15281 |
| Direction | - |
Sequence
Transcript: 741 (bp)
ATGGGTCGTAAATTCTGCGTTGGAGGCAACTGGAAAATGAACGGATCAAAGGATTCAATCACAGAATTGGCCAAGATCCTTTCCACCGGTCCATTGGATCCCAATACCGAGGTCGTCGTCGGATGCCCAAGTGTGTACATTTCATTCGCTCGCGGACTCCTTCCCGCCTCAATCAACGTTGCTGGACAGAACTGCTACAAAGTCAAGTCGGGAGCCTTCACCGGCGAGGTCTCGCCCGCGATGTTGAAAGACGTCGGCGCCGACTGGGTTATTCTCGGCCACTCGGAGAGACGCGCCATTTTCGGCGAGAGCGACGAATTGGTCGCCGACAAGGTTGCGTTTGCTCTTGCTGAGGGCTTGAAGGTCATTGCTTGCATCGGCGAGACATTGCAGGAACGCGAAGCCGGCCAAACCGAGGCCGTGTGCTTCCGCCAAACAAAGGCTATCGCAAATGTCGTCAAGGACTGGTCGAATGTCGTCGTCGCATACGAGCCAGTTTGGGCCATCGGAACCGGCAAGACAGCGACACCGGCACAAGCCCAAGAGGTCCACGCAGCTCTCCGCAAGTGGTTCGTCGATAACGTCTCGCAGGCCGTTTCCGACTCGATCAGAATCCAATACGGTGGATCAGTCACCGCAGCCAATGCTCGCGAGCTCGCATCTCAACCCGACATCGACGGCTTCTTGGTCGGTGGCGCGTCGCTCAAGCCCGAGTTCGTGCAAATTGTCAACGCCCGACAA
Protein: 247 (aa)
MGRKFCVGGNWKMNGSKDSITELAKILSTGPLDPNTEVVVGCPSVYISFARGLLPASINVAGQNCYKVKSGAFTGEVSPAMLKDVGADWVILGHSERRAIFGESDELVADKVAFALAEGLKVIACIGETLQEREAGQTEAVCFRQTKAIANVVKDWSNVVVAYEPVWAIGTGKTATPAQAQEVHAALRKWFVDNVSQAVSDSIRIQYGGSVTAANARELASQPDIDGFLVGGASLKPEFVQIVNARQ
| Type | Start | End | Length |
| CDS |
14377 |
14928 |
552 |
| CDS |
14993 |
15070 |
78 |
| CDS |
15171 |
15281 |
111 |
| intron |
14929 |
14992 |
64 |
| intron |
15071 |
15170 |
100 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_321467 |
AGAP001630-PA [Anopheles gambiae str. PEST] gb|EAA00928.4| AGAP001630-PA [Anopheles gambiae str. PEST] |
1e-121 |
| InterPro |
IPR020861 |
Triosephosphate isomerase, active site |
|
| InterPro |
IPR013785 |
Aldolase-type TIM barrel |
|
| InterPro |
IPR000652 |
Triosephosphate isomerase |
|
| Gene Ontology(BP) |
GO:0008152 |
metabolic process |
|
| Gene Ontology(MF) |
GO:0004807 |
triose-phosphate isomerase activity |
|
| Gene Ontology(MF) |
GO:0003824 |
catalytic activity |
|
| Pfam |
PF11095.3 |
Gem-associated protein 7 (Gemin7) |
0.011 |
| Pfam |
PF00121.13 |
Triosephosphate isomerase |
1.1e-88 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. sapiens |
ENSP00000229270 |
| D. plexippus |
DPOGS200089PA |
| H. sapiens |
ENSP00000443599 |
| C. quinquefasciatus |
CPIJ002354 |
| T. castaneum |
TC007346 |
| H. melpomene |
HMEL009810-PA |
| A. aegypti |
AAEL002542 |
| H. sapiens |
ENSP00000379933 |
| A. mellifera |
GB17473-PA |
| B. mori |
BGIBMGA000559-TA |
| A. gambiae |
AGAP001630 |
| P. humanus |
PHUM247280-PA |
| N. vitripennis |
NV17380-PA |
| P. vanderplanki |
Pv.12036 |
| M. musculus |
ENSMUSG00000023456 |
| D. melanogaster |
FBgn0086355 |