MidgeBase gene description page [Pn.01560]
Outline
| Gene ID | Pn.01560 |
| Type | Protein coding gene |
| Scaffold | PnScaf1424 |
| Start | 11700 |
| End | 13759 |
| Direction | + |
Sequence
Transcript: 1158 (bp)
ATGTTGAAGGCAATAACACCCGAGAAGGATACTCTTCTAGAGAAATCCATGATTCCCATCATTGATATCTCGTTCGGTACCGATGAAGTTCCACAGAAAAGTGTAGTGAATCGAGTTGCGGTTCAACTGTCAAAGGCCTTCAAAGATAAAGGTATGGCCATGCTTGTCAACCACGGAATCACAGAAGAAAAGCTGAAAATTGCGTACAATTATTTCGATGAGTTTTGTAAACTTCCCGATGACACAAAAGAGTTATATTTAAGAAAGAGTGAAAATGGAAATCACGGTTACGTGAAGCCGAATCAAGAGACTTTCGAAGGAGGCACGAAAGAAATTCGTCATTCCTTCAACATATGCACGCTTAATGCAAAACTTCCTGACGATCCACTGCCTGGTTTCAAGACTCATATGAGCGAGTTAACGAAAGACTTTAAAAATATCACGGGACTTTTACTGCAAGCATTGGCCATCGGTCTCGAGTTACCGCCCAATTTCTTTATCGAAAAGCACACGCACATGCTTGATGCGGATAATGAAACGACTTTTCGATTACTCTACTATCCGCCATTGGTAATTGATGATGATAAGAATGAAAACTTCACAAAAGGATTTGCTACTTATTGTCATCAAAAGACTAAATTTGATGAGTCAAAATTGGGCTCATTGGACCTGAAAGATAGCATCGATGAGACACACATCAACAAGAATGAAGTTAAAAATTATACTCGCTGTGGAGCGCACTGTGATTACGGGACGTTTACTTTGCTTATTCAAGACGTTGAGGGTGGACTAGAAGTGAAACTCCCAAACAGTGAAAAGTGGCAACGAGTCGGCCACTTAGGCAATGCAATTTTCGCAAATGTCGGCGAGCTTCTGTCAATTTGGACAAATGGAGCTTATCCGGCTCTTAATCATCGTGTTGTGATTCCTGAAAACTCCGTAGCGTGCACAAAAGGCCGGCATGCAATCGCATATTTTGTTCATCCCGACAATCTTACACCAATTGTGCCAATAGATGTTTCATCAGCATCGTCATCTCAGGAGGCTTTAGACGGAAAACAGCAAAAGACGAGGAAAAAGTCGTTTAAAGCAGCAAAAATGAAAATTTACAATGCGTATCAGCACGTTCAGAGACGATTCAAGGAAACTTATGCATCA
Protein: 386 (aa)
MLKAITPEKDTLLEKSMIPIIDISFGTDEVPQKSVVNRVAVQLSKAFKDKGMAMLVNHGITEEKLKIAYNYFDEFCKLPDDTKELYLRKSENGNHGYVKPNQETFEGGTKEIRHSFNICTLNAKLPDDPLPGFKTHMSELTKDFKNITGLLLQALAIGLELPPNFFIEKHTHMLDADNETTFRLLYYPPLVIDDDKNENFTKGFATYCHQKTKFDESKLGSLDLKDSIDETHINKNEVKNYTRCGAHCDYGTFTLLIQDVEGGLEVKLPNSEKWQRVGHLGNAIFANVGELLSIWTNGAYPALNHRVVIPENSVACTKGRHAIAYFVHPDNLTPIVPIDVSSASSSQEALDGKQQKTRKKSFKAAKMKIYNAYQHVQRRFKETYAS
| Type | Start | End | Length |
| CDS |
11700 |
11775 |
76 |
| CDS |
12130 |
12245 |
116 |
| CDS |
12325 |
12429 |
105 |
| CDS |
12513 |
12763 |
251 |
| CDS |
12837 |
13032 |
196 |
| CDS |
13153 |
13192 |
40 |
| CDS |
13324 |
13448 |
125 |
| CDS |
13508 |
13756 |
249 |
| intron |
11776 |
12129 |
354 |
| intron |
12246 |
12324 |
79 |
| intron |
12430 |
12512 |
83 |
| intron |
12764 |
12836 |
73 |
| intron |
13033 |
13152 |
120 |
| intron |
13193 |
13323 |
131 |
| intron |
13449 |
13507 |
59 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001845189 |
conserved hypothetical protein [Culex quinquefasciatus] gb|EDS39443.1| conserved hypothetical protein [Culex quinquefasciatus] |
1e-117 |
| InterPro |
IPR005123 |
Oxoglutarate/iron-dependent dioxygenase |
|
| Gene Ontology(BP) |
GO:0055114 |
oxidation-reduction process |
|
| Gene Ontology(MF) |
GO:0016706 |
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors |
|
| Gene Ontology(MF) |
GO:0016491 |
oxidoreductase activity |
|
| Pfam |
PF03171.15 |
2OG-Fe(II) oxygenase superfamily |
3.3e-13 |
| Pfam |
PF14226.1 |
non-haem dioxygenase in morphine synthesis N-terminal |
1.8e-16 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| D. plexippus |
DPOGS213103PA |
| D. melanogaster |
FBgn0038981 |
| C. quinquefasciatus |
CPIJ003419 |
| H. melpomene |
HMEL006554-PA |
| B. mori |
BGIBMGA007863-TA |
| D. melanogaster |
FBgn0053093 |
| N. vitripennis |
NV11283-PA |
| A. aegypti |
AAEL005822 |
| D. melanogaster |
FBgn0053099 |
| S. invicta |
SI2.2.0_05267 |
| P. vanderplanki |
Pv.10277 |
| A. gambiae |
AGAP002883 |
| A. mellifera |
GB19428-PA |