MidgeBase gene description page [Pn.01547]
Outline
| Gene ID | Pn.01547 |
| Type | Protein coding gene |
| Scaffold | PnScaf1407 |
| Start | 1752 |
| End | 5346 |
| Direction | + |
Sequence
Transcript: 951 (bp)
ATGGCCGACAAAAATAAACAGGGTGAATATTATTCGAGACCAGCTAAGATGGGAAAATGGGAAGGATTCAAACACTTTCTGTGGAACAGTGAGACTAGCGAGCTATTAGGACGAACTGGAGGCAGTTGGGCTAAAATTTTGTTGTTTTACGTAATCTTCTATGCTGCATTGGCTGGTTTCTTTGCTGCTATTTTTGCCGTTTTTTATCAAACATTGGATGAAAGTAAACCGAAGTGGCAGTTGGATAACGGTCTGATTGGTTCAAACCCTGGACTCGGATTTCGTCCAATGCCACCAGAATCTAATGTTGAAAGCACCCTTGTATGGTTCGAGTCTGCAAACGAAAAGAACATTGAATATTGGATCACAGCCCTTGATGAGTTTTTGGAAGTTTACAAAAAAGAAGACAAAGAAGCTGAAAAAAATCGAATGGATTGTAATGCTCAAAATCATCCGAAGGACGGAAAAGTTTGCCGTGTTGATGTATCACCTAGTAATTTCGGTGCATGCACAAAAGAAAATCAATATGGCTACAACAAAGCTTCGCCATGTGTTTTCTTAAAGTTAAATAAGATATACGGATGGAATCCGGAGTTCTTTAATAAAACAAGTACCCTTCCTGAAAACATGCCCCAAGATTTGCAAGATCAAATAGCGGGTATTTCAGAAGACGATAAGAATCACGAAATGATTTGGGTTTCATGCGAAGGAGAAAATCCAGCGGATATCGAAAACTTGGGACCTATAAATTACATTCCTAAACGTGGTTTTCCTGGCTACTATTTTCCTTTCATGAATCAAAAAGGTTACCAACCTCCTGTTCTTGCTATTAACTTCGAGCGTCCAAAAACCGGTGTCCTCATTAACATTGAATGTAAAGCATGGGCTCGTAACATTGCGCATGATCGGGCTGAGCGAAGAGGCTCAGTTCATTTCGAATTGATGGTCGAT
Protein: 317 (aa)
MADKNKQGEYYSRPAKMGKWEGFKHFLWNSETSELLGRTGGSWAKILLFYVIFYAALAGFFAAIFAVFYQTLDESKPKWQLDNGLIGSNPGLGFRPMPPESNVESTLVWFESANEKNIEYWITALDEFLEVYKKEDKEAEKNRMDCNAQNHPKDGKVCRVDVSPSNFGACTKENQYGYNKASPCVFLKLNKIYGWNPEFFNKTSTLPENMPQDLQDQIAGISEDDKNHEMIWVSCEGENPADIENLGPINYIPKRGFPGYYFPFMNQKGYQPPVLAINFERPKTGVLINIECKAWARNIAHDRAERRGSVHFELMVD
| Type | Start | End | Length |
| CDS |
1752 |
1881 |
130 |
| CDS |
4072 |
4242 |
171 |
| CDS |
4329 |
4418 |
90 |
| CDS |
4492 |
4673 |
182 |
| CDS |
4839 |
4946 |
108 |
| CDS |
5010 |
5178 |
169 |
| CDS |
5243 |
5343 |
101 |
| intron |
1882 |
4071 |
2190 |
| intron |
4243 |
4328 |
86 |
| intron |
4419 |
4491 |
73 |
| intron |
4674 |
4838 |
165 |
| intron |
4947 |
5009 |
63 |
| intron |
5179 |
5242 |
64 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001654893 |
sodium/potassium-dependent atpase beta-2 subunit [Aedes aegypti] gb|EAT37221.1| sodium/potassium-dependent atpase beta-2 subunit [Aedes aegypti] |
1e-118 |
| InterPro |
IPR000402 |
ATPase, P-type cation exchange, beta subunit |
|
| Gene Ontology(BP) |
GO:0046034 |
ATP metabolic process |
|
| Gene Ontology(BP) |
GO:0006813 |
potassium ion transport |
|
| Gene Ontology(BP) |
GO:0006814 |
sodium ion transport |
|
| Gene Ontology(CC) |
GO:0016020 |
membrane |
|
| Gene Ontology(MF) |
GO:0005391 |
sodium:potassium-exchanging ATPase activity |
|
| Pfam |
PF00287.13 |
Sodium / potassium ATPase beta chain |
1e-71 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| B. mori |
BGIBMGA006062-TA |
| A. aegypti |
AAEL010783 |
| D. melanogaster |
FBgn0032946 |
| N. vitripennis |
NV13200-PA |
| P. vanderplanki |
Pv.07219 |
| P. humanus |
PHUM465330-PA |
| S. invicta |
SI2.2.0_11685 |
| H. sapiens |
ENSP00000356789 |
| M. musculus |
ENSMUSG00000026576 |
| H. sapiens |
ENSP00000356787 |
| H. sapiens |
ENSP00000356790 |
| T. castaneum |
TC014031 |
| A. mellifera |
GB19020-PA |
| C. quinquefasciatus |
CPIJ801920 |
| H. sapiens |
ENSP00000423450 |
| A. gambiae |
AGAP009595 |
| H. melpomene |
HMEL013099-PA |
| D. plexippus |
DPOGS201884PA |