MidgeBase gene description page [Pn.01503]
Outline
| Gene ID | Pn.01503 |
| Type | Protein coding gene |
| Scaffold | PnScaf1400 |
| Start | 12519 |
| End | 20563 |
| Direction | + |
Sequence
Transcript: 2244 (bp)
ATGCACGCGGCATTTGCAAACGCTGGCAAGAAGAAGGGCCTCGAGGTCTGGCGCATTGAGAACTTCGAGCCCGTAGCATACCCGAAAAATGATTATGGCAAGTTTTATACTGGCGATTCGTACATCGTTTTGAATACATTGGAGAGCAAGAGCAAGCAGTTGTCATGGGACGTGCACTTCTGGCTCGGCCTCGAGACGACGCAAGATGAGGCAGGCGCGGCGGCCATTTACACGGTCCAGCTGGACGACGCCTTGGGCGGCGCACCGGTGCAGCACCGCGAAGTGCAAGAGCACGAATCGACGCTCTTCCTCAACTACTTCAAGAGCGGCATTCGCTACATGCCGGGCGGCGTGGCGAGCGGCTTCAAGAAGACGGAAACGAACGCGGCGGGCGAGAAGCGGCTGTTCCACGTCAAGGGCAAGAAGAACATTCGCGTGCGCCAGGTCGACCTCACCATTGGCTCCATGAACAAGGGCGACTGCTTCATCCTCGATGCCGGCAACAAGATCTACGTGTATGTCGGCGTCAAGTCGAAGCGCGTCGAAAAAATGAAGGCCATCAGCGCGGCCAATCAGATCCGCGACCAGGACCACAACGGCCGTGCCGCCGTCGAGATCGTCGACGAGTACTCGAGCGAGACGGACAAGCTGCACTTCTTCGAGGTGCTCGGCTCGGGCTCGCCCGACCAAGTGCCCGACGACAGCACCGCCGAGGACGATGCCGAGTTCGAGCGCAAGGACGAGAGCGCGACGACGCTCTACACCGTCAGTGACGCGAGCGGCCAGCTGAAGGTCGAGCCGATCGCGCAAAAGCCGCTCAAGCAGGAGATGCTCAACACCAACGACTGCTTCATCCTCGACACCGGCAGCGGCATCTACGTGTGGGTGGGAAAGAAGGCGACCGACCAGGAGAAGAAGCAGGCGATTTCGCGCGCGCAGGGATTTCTGCAGACGAAAAAGTACCCGGTTTGGACGAAGGTCACGCGCATCGTCGAGGGCGCAGAGTCGGCGCCTTTCAAGCAGTACTTCTTTACGTGGCGCGACCATGGCGCGTCACACTCGCGTCTCATTCGTGCGGCAAACGACAACGACAGCGACACGGCGACAGACGAGGAGTTCGATGCGTCGGTGCTGCACAAGCTGAAGAAGAGCGGCGGTCGTGCGATTGGCTTTATGCCGGACAATGGTGAGGGCGACGCGGAGGTTTGGCGAGTCGAGAACATGGAGCTCGTGCCGGTGCCGGTCGACAACTATGGATTCTTCTTCGGCGGCGACTCTTATGTCGTGAAGTACGAGTACAGAAACAAGCGCGGCGGCCACGGCTTCGTCATTTACTACTGGCAGGGCTTGAGCTCGTCCACTGACGAGAAGGCGGCGTCGGCCATTTACGCGGCCCGCTTGGACGGCGAGCTGGGCGGCAAGGCGGTGCAGGTTCGTGTCGTTCAGGGCTTCGAGCCGCGTCACTTCCTGAAGATCTTCAAGGGCAAAATTGTGGTGTTCACGGGCGGCAAGGCGTCGGGCTTCAAGAATGTCCGCGACCACGACTCGTACGATGTCGACGGCACACGGCTGTTCCGCATTCGAGGAACTTGCGCCGAGGACGTTCGCGCCACTCAAGTGGAGGAGACTGCTAAGGCGCTCGCGTCGGACGACGTCTTCATCCTTGAGACGCCTTCGAATACTTTCGTGTGGAACGGCAAAGGAGCGAATGACTTCGAGACCTCGATGGGCTTGAGCGTCAGCAAGACAATCTCGCCGGACCGCGAGGCGGTCGTTATTAGTGAGGGCGACGAGCCGGCTGAGTTCTGGACGGCTTTGGGCGGCAAAGCTGACTACGACTACGAGATTGATCCGCCCGGTGCGCCGTTCTTGGAGCCGCGACTCTTCCACTGCGCGATCAAGGCCAACGGCAAGTTCAAGGTCGAGGAGGTCGCCAAATTCGAGCAGGACGATCTCGATCCCGACGACATCATGGTGCTTGATGGCGGCGATGAAGTCTACGTGTGGGTCGGACAAGGATCGACCGAGGAGGAGAAGGCTAAGAGTCTCGACATGGCTATGGAATATATTCGTACCGACCCGACTGACAGAAGCGAAGAGACGACTCCTTTGATCACAATCCAACAAGGTGGCGAGCCGAGAAGCTTCAAGCGACTCTTCCCCGCATGGAATGACTTCTTGTGGGAGAACTACATTTCGTACGAAGACTACAAGAAGCAGTACTTGGAGAGCATCAAAGATAAA
Protein: 748 (aa)
MHAAFANAGKKKGLEVWRIENFEPVAYPKNDYGKFYTGDSYIVLNTLESKSKQLSWDVHFWLGLETTQDEAGAAAIYTVQLDDALGGAPVQHREVQEHESTLFLNYFKSGIRYMPGGVASGFKKTETNAAGEKRLFHVKGKKNIRVRQVDLTIGSMNKGDCFILDAGNKIYVYVGVKSKRVEKMKAISAANQIRDQDHNGRAAVEIVDEYSSETDKLHFFEVLGSGSPDQVPDDSTAEDDAEFERKDESATTLYTVSDASGQLKVEPIAQKPLKQEMLNTNDCFILDTGSGIYVWVGKKATDQEKKQAISRAQGFLQTKKYPVWTKVTRIVEGAESAPFKQYFFTWRDHGASHSRLIRAANDNDSDTATDEEFDASVLHKLKKSGGRAIGFMPDNGEGDAEVWRVENMELVPVPVDNYGFFFGGDSYVVKYEYRNKRGGHGFVIYYWQGLSSSTDEKAASAIYAARLDGELGGKAVQVRVVQGFEPRHFLKIFKGKIVVFTGGKASGFKNVRDHDSYDVDGTRLFRIRGTCAEDVRATQVEETAKALASDDVFILETPSNTFVWNGKGANDFETSMGLSVSKTISPDREAVVISEGDEPAEFWTALGGKADYDYEIDPPGAPFLEPRLFHCAIKANGKFKVEEVAKFEQDDLDPDDIMVLDGGDEVYVWVGQGSTEEEKAKSLDMAMEYIRTDPTDRSEETTPLITIQQGGEPRSFKRLFPAWNDFLWENYISYEDYKKQYLESIKDK
| Type | Start | End | Length |
| CDS |
12519 |
12578 |
60 |
| CDS |
16124 |
16198 |
75 |
| CDS |
16519 |
18360 |
1842 |
| CDS |
18744 |
18827 |
84 |
| CDS |
18899 |
18965 |
67 |
| CDS |
19056 |
19114 |
59 |
| CDS |
20504 |
20560 |
57 |
| intron |
12579 |
16123 |
3545 |
| intron |
16199 |
16518 |
320 |
| intron |
18361 |
18743 |
383 |
| intron |
18828 |
18898 |
71 |
| intron |
18966 |
19055 |
90 |
| intron |
19115 |
20503 |
1389 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001846164 |
Gelsolin [Culex quinquefasciatus] gb|EDS42860.1| Gelsolin [Culex quinquefasciatus] |
0.0 |
| InterPro |
IPR007122 |
Gelsolin |
|
| InterPro |
IPR007123 |
Gelsolin domain |
|
| Gene Ontology(MF) |
GO:0003779 |
actin binding |
|
| Pfam |
PF00626.17 |
Gelsolin repeat |
1.4e-91 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
| Gene ID |
| Pn.13896 |
| Pn.12702 |
Orthologous genes
| Species |
Gene ID |
| H. melpomene |
HMEL012404-PA |
| P. humanus |
PHUM507400-PA |
| A. aegypti |
AAEL006096 |
| P. vanderplanki |
Pv.00129 |
| T. castaneum |
TC013108 |
| D. melanogaster |
FBgn0003187 |
| C. quinquefasciatus |
CPIJ004629 |
| A. aegypti |
AAEL006102 |
| P. humanus |
PHUM042690-PA |
| H. sapiens |
ENSP00000409358 |
| H. sapiens |
ENSP00000283713 |
| H. sapiens |
ENSP00000297029 |
| H. sapiens |
ENSP00000394030 |
| H. sapiens |
ENSP00000443207 |
| M. musculus |
ENSMUSG00000026879 |
| H. sapiens |
ENSP00000373266 |
| H. sapiens |
ENSP00000248444 |
| H. sapiens |
ENSP00000362924 |
| D. plexippus |
DPOGS204919PA |
| B. mori |
BGIBMGA001730-TA |
| B. mori |
BGIBMGA001755-TA |
| D. melanogaster |
FBgn0010225 |
| H. sapiens |
ENSP00000341375 |
| H. sapiens |
ENSP00000375962 |
| M. musculus |
ENSMUSG00000026175 |
| M. musculus |
ENSMUSG00000002565 |
| H. sapiens |
ENSP00000404226 |
| H. sapiens |
ENSP00000410657 |
| H. sapiens |
ENSP00000362914 |
| N. vitripennis |
NV11429-PA |
| H. sapiens |
ENSP00000362913 |
| A. aegypti |
AAEL000334 |
| H. melpomene |
HMEL002310-PA |
| H. sapiens |
ENSP00000377882 |
| A. aegypti |
AAEL006095 |
| A. gambiae |
AGAP011369 |
| H. sapiens |
ENSP00000430997 |
| H. sapiens |
ENSP00000416586 |
| H. melpomene |
HMEL010828-PA |
| B. mori |
BGIBMGA003120-TA |
| A. aegypti |
AAEL006090 |
| H. sapiens |
ENSP00000362929 |
| H. sapiens |
ENSP00000257861 |
| C. quinquefasciatus |
CPIJ004696 |
| C. quinquefasciatus |
CPIJ004628 |
| P. vanderplanki |
Pv.02807 |
| S. invicta |
SI2.2.0_03778 |
| H. sapiens |
ENSP00000411293 |
| A. gambiae |
AGAP009232 |
| H. sapiens |
ENSP00000422096 |
| H. sapiens |
ENSP00000390189 |
| H. sapiens |
ENSP00000445823 |
| A. mellifera |
GB17898-PA |
| T. castaneum |
TC004676 |
| D. plexippus |
DPOGS215132PA |
| H. sapiens |
ENSP00000340888 |
| P. vanderplanki |
Pv.00127 |
| D. plexippus |
DPOGS201326PA |
| B. mori |
BGIBMGA003119-TA |
| H. sapiens |
ENSP00000409270 |
| H. melpomene |
HMEL022559-PA |
| B. mori |
BGIBMGA001754-TA |