MidgeBase gene description page [Pn.01482]
Outline
| Gene ID | Pn.01482 |
| Type | Protein coding gene |
| Scaffold | PnScaf1377 |
| Start | 66622 |
| End | 68077 |
| Direction | + |
Sequence
Transcript: 318 (bp)
ATGGGCGAGAGACGTGGAACAAAAGCATTGGAGTTGTGGTGTCGTCGCATGGTCGAGGGCTACAAGAATGTGCGGATTGATAACATGACGACATCGTGGCGTGATGGATTGGCATTTTGTGCATTGGTTAGCAAATGTTCCACACTCAAGCAACTGCCAGATTTGATTTTGTCGAGAAGAAACGAGTCACAAAGCGAATTTGCTTGGCTTCTCATCTTGTCTCCATTCATGGAGAGTAATGCCGATCGAGTTGAAAAGAGGAGCAGCACAAAGGCATCGCTGAAATCTTTGCGACGAACGAAAGAATGGGAGAAATAT
Protein: 106 (aa)
MGERRGTKALELWCRRMVEGYKNVRIDNMTTSWRDGLAFCALVSKCSTLKQLPDLILSRRNESQSEFAWLLILSPFMESNADRVEKRSSTKASLKSLRRTKEWEKY
| Type | Start | End | Length |
| CDS |
66622 |
66788 |
167 |
| CDS |
67924 |
68074 |
151 |
| intron |
66789 |
67923 |
1135 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001652498 |
hypothetical protein AaeL_AAEL007011 [Aedes aegypti] gb|EAT41353.1| conserved hypothetical protein [Aedes aegypti] |
5e-16 |
| InterPro |
IPR001715 |
Calponin homology domain |
|
| Gene Ontology(MF) |
GO:0005515 |
protein binding |
|
| Pfam |
PF00307.26 |
Calponin homology (CH) domain |
4.5e-07 |
| Pfam |
PF11971.3 |
CAMSAP CH domain |
0.00098 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| S. invicta |
SI2.2.0_02474 |