MidgeBase gene description page [Pn.01376]
Outline
| Gene ID | Pn.01376 |
| Type | Protein coding gene |
| Scaffold | PnScaf1318 |
| Start | 4553 |
| End | 8482 |
| Direction | + |
Sequence
Transcript: 1506 (bp)
ATGTCGACCTCTTCAAACCAACTGAGTGACTTCAAAAAACAACTCAAGAATGGACCTGGAACTGCGACTCTCGGCACTGGAGCCCCGATTGGCGTCAAAACCGCCTCGCAAACTGTCGGCCCACGCGGCCCCATCCTCCTGCAGGACATCAACTACATCGACGAAATGGCTCACTTTGACCGCGAGCGAATTCCCGAAAGAGTCGTCCACGCGAAAGGCGCCGGTGCATTCGGGTATTTCGAAGTGACTCACGATATCACGAAGTACTGTGCAGCAAAAGTCTTTGAAAAAGTTGGCAAGCGCACCCCTCTCGCCGTTCGCTTCTCCACTGTTGGTGGCGAGAGCGGATCAGCCGACACGGTGCGTGATCCACGCGGCTTTGCCGTGAAATTCTACACGGATGATGGAATTTGGGACTTGGTCGGAAACAACACGCCAATCTTCTTCATTCGCGATCCGATCTTCTTCCCGAGCTTCATCCACACACAAAAGCGCAACCCACAGACTCATCTTAAGGACCCCGACATGTTCTGGGACTTCATCACACTGCGACCGGAGACTACTCATCAAGTTATGTTCCTGTTCGCGGACCGCGGCATTCCCGACGGCTACCGCTTCATGAACGGCTACGGCTCGCACACATTCAAGACGGTCAACGACAAGGGCGAAGCGTTCTACGTGAAATTCCACTTCAAGACAGCGCAGGGCATCAAGAACCTGGACGTGAAGCGCGCCGAGGAGCTCTCCGCCTCCGATCCCGACTACTCGATTCGCGACCTCTACGACGCCATCGGCCGTGGCGACTTCCCCTCGTGGAACTTGAACATCCAAGTCATGACCTTCGAGGAGGCGGAGCGCTTCAAATGGAATCCGTTCGACGTCACAAAAATCTGGCCGCAGAAGGACTACCCGCTCATCCCCGTCGGTCGCATGGTGCTCGACCGAAATCCCAACAACTATTTCGCCGAGGTCGAGCAGATCGCCTTCTGCCCCTCGCAGCTGGTGCCCGGCATCGAGGCCTCGCCCGACAAGATGCTGCAGGGTCGTCTCTTCTCGTACGTCGACACACACCGTCATCGCTTGGGCGCCAACTACCTCCAGCTGCCCGTCAACTGTCCCTACCGCGTCAGCGTCAAGAACTACCAGCGCGACGGCCCGATGTGCTTCAACGATAACCAGGGCGGTGCTCCGAACTACTACCCGAACAGCTTCGGCGGACCCGAGCCATCGAAGCGTGTCGTCGACTTGCAGCAGCCGTACAAGGTCTCGGGCGAGGTCTACCGCTTCGACAGCGGCGACGAGGACAACTTTAGCCAGGCGACCATTTTCTGGACGAAGGTCCTCGACGAAGCCGCTCGCAAACGCCTCGTCTCGAACATCGCCGGCCACGTCGTCAACGCCAAAGAGTTCATTCAGGAGCGCGCCATCAAGAACTTCTCGGAGGTGTCGGCCGACTTTGGCCAACAGTTGAGAGAGGCCATCAACCTCAAGAAGACGGCGAAGATG
Protein: 502 (aa)
MSTSSNQLSDFKKQLKNGPGTATLGTGAPIGVKTASQTVGPRGPILLQDINYIDEMAHFDRERIPERVVHAKGAGAFGYFEVTHDITKYCAAKVFEKVGKRTPLAVRFSTVGGESGSADTVRDPRGFAVKFYTDDGIWDLVGNNTPIFFIRDPIFFPSFIHTQKRNPQTHLKDPDMFWDFITLRPETTHQVMFLFADRGIPDGYRFMNGYGSHTFKTVNDKGEAFYVKFHFKTAQGIKNLDVKRAEELSASDPDYSIRDLYDAIGRGDFPSWNLNIQVMTFEEAERFKWNPFDVTKIWPQKDYPLIPVGRMVLDRNPNNYFAEVEQIAFCPSQLVPGIEASPDKMLQGRLFSYVDTHRHRLGANYLQLPVNCPYRVSVKNYQRDGPMCFNDNQGGAPNYYPNSFGGPEPSKRVVDLQQPYKVSGEVYRFDSGDEDNFSQATIFWTKVLDEAARKRLVSNIAGHVVNAKEFIQERAIKNFSEVSADFGQQLREAINLKKTAKM
| Type | Start | End | Length |
| CDS |
4553 |
4600 |
48 |
| CDS |
6776 |
7033 |
258 |
| CDS |
7129 |
7156 |
28 |
| CDS |
7240 |
7356 |
117 |
| CDS |
7425 |
8479 |
1055 |
| intron |
4601 |
6775 |
2175 |
| intron |
7034 |
7128 |
95 |
| intron |
7157 |
7239 |
83 |
| intron |
7357 |
7424 |
68 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
ADM26625 |
catalase [Polypedilum vanderplanki] |
0.0 |
| InterPro |
IPR020835 |
Catalase-like domain |
|
| InterPro |
IPR018028 |
Catalase, mono-functional, haem-containing |
|
| InterPro |
IPR002226 |
Catalase haem-binding site |
|
| InterPro |
IPR024708 |
Catalase active site |
|
| InterPro |
IPR011614 |
Catalase core domain |
|
| InterPro |
IPR010582 |
Catalase immune-responsive domain |
|
| Gene Ontology(BP) |
GO:0006979 |
response to oxidative stress |
|
| Gene Ontology(BP) |
GO:0055114 |
oxidation-reduction process |
|
| Gene Ontology(MF) |
GO:0020037 |
heme binding |
|
| Gene Ontology(MF) |
GO:0004096 |
catalase activity |
|
| Pfam |
PF00199.14 |
Catalase |
6e-189 |
| Pfam |
PF06628.7 |
Catalase-related immune-responsive |
2.6e-19 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| S. invicta |
SI2.2.0_80391 |
| A. mellifera |
GB11648-PA |
| P. vanderplanki |
Pv.08902 |
| B. mori |
BGIBMGA000701-TA |
| N. vitripennis |
NV16124-PA |
| H. sapiens |
ENSP00000241052 |
| C. quinquefasciatus |
CPIJ801555 |
| D. plexippus |
DPOGS209670PA |
| M. musculus |
ENSMUSG00000027187 |
| H. melpomene |
HMEL014202-PA |
| H. melpomene |
HMEL008463-PA |
| D. plexippus |
DPOGS202587PA |
| P. humanus |
PHUM336860-PA |
| B. mori |
BGIBMGA011431-TA |
| T. castaneum |
TC011385 |
| D. plexippus |
DPOGS202586PA |
| A. aegypti |
AAEL013407 |
| T. castaneum |
TC011090 |
| D. melanogaster |
FBgn0032061 |
| D. melanogaster |
FBgn0000261 |
| T. castaneum |
TC000084-GA |
| A. gambiae |
AGAP004904 |
| B. mori |
BGIBMGA011430-TA |