MidgeBase gene description page [Pn.01364]
Outline
| Gene ID | Pn.01364 |
| Type | Protein coding gene |
| Scaffold | PnScaf1309 |
| Start | 35196 |
| End | 52767 |
| Direction | - |
Sequence
Transcript: 1512 (bp)
ATGGATCCATTCAACTCCGATCCGTGGCCATCACCGCCGATCATCGACGGACTGAGCGATCAAATGGATTCGCTGGCGGAGCTGCAGGAGGGCGCCTTTGAGCCGCAGGTTCGAGCACGCTCCAACACATGGCCTCTGCCGCGTCCGGAGAACTTTGTCGATCAGAACGAAGATGCGGAAAACAACCAGCAGTCTAATAATCAGCAATCAGTTACTGGAATTCCACCCACGCCGACATCAGTGTCAAAGAAGAACTCATCGCGACGCAATGCATGGGGAAATTTGTCATATGCAGATCTTATTACAAAAGCAATCAGTTCATCGACAGACAATAGACTGACACTAAGTCAGATTTACGAGTGGATGGTGCAGAATGTTCCATATTTTAAAGACAAAGGCGATTCCAACAGCAGTGCTGGATGGAAGAACTCAATTCGTCACAATTTGTCACTACACAATCGATTCATGAGAGTACAAAACGAGGGCACGGGCAAATCATCTTGGTGGATGCTCAATCCCGACGCAAAGCCAGGCAAGTCGGTGCGACGACGAGCGGCATCCATGGAGACGTCGAAATTCGAAAAGCGACGTGGGCGAGTTAAGAAGCGCGTCGAGCAAATACGTAATGGAGTGATAACAAACGTTTCTGGTGTTCTAAATGACGTCAATTCATCGCCCGGCAGCAGTGTGAGTGAAGGATTGGATCTTTTCCCAGAGAGCCCTCTCCATAGTAGTGCAAATTTCCAATTGTCACCCGATTTTAGACAGAGAGCGAGCTCAAACGCGAGCTCTGTGGGGAGACTGAGTCCGATTCCCTCGCTGGCAATCGAAAACGATTGGGATTGCTTCACCGAGACGGACAATGCCAACGGAAACGGTGCGCCAAATCCGATCCTTGAGGAGTTAGCCGGTACACTGGAAGACGAGTTGAAGTTACAGAATGATTTATTCAACGGGTTCACGACAGCAAGTCTACATCATCCGCAACCGCCACCGCCGCCCTACCAACCGCCACAGTTCGCAATGCACCCAACATATGGCTTGAAGCAGCCGCCACAAGCAATCCACTTGCTGCAGAATAACACGCGAGAGAGCATGTCACCGGGATCAGTAACGGGAATGTCGCCGGCATACAGCGAGCCGTCGCCCGACTACTCGATGCTCGTCAATCAGAACCGACTGCCTCGACCGTCATCCAACAGTCCGCCTATTAATACCGCACAAAATCTTAACACAACGCAACATATCGCACATAACACACCTTCCACTCTAATGGGTCAATTCATCGAGGTCCTCAACAATCAGGCGAACTTGGATGACTTGAATTTGAATTTGGAGTCGTTTCAAGGCGGATTGGACTGCAACGTCGATGAGGTAATAAAGCACGAGCTCAGCTACGGGCCGCTAGATTTTAACTTTCAAAACAACAATCAGGAGGGCATGGTGGAAACAATAAACGGAGGTGATGCTCAGCAACAGCATTCGACAGCTAATCACAACCACGGCGTTTGC
Protein: 504 (aa)
MDPFNSDPWPSPPIIDGLSDQMDSLAELQEGAFEPQVRARSNTWPLPRPENFVDQNEDAENNQQSNNQQSVTGIPPTPTSVSKKNSSRRNAWGNLSYADLITKAISSSTDNRLTLSQIYEWMVQNVPYFKDKGDSNSSAGWKNSIRHNLSLHNRFMRVQNEGTGKSSWWMLNPDAKPGKSVRRRAASMETSKFEKRRGRVKKRVEQIRNGVITNVSGVLNDVNSSPGSSVSEGLDLFPESPLHSSANFQLSPDFRQRASSNASSVGRLSPIPSLAIENDWDCFTETDNANGNGAPNPILEELAGTLEDELKLQNDLFNGFTTASLHHPQPPPPPYQPPQFAMHPTYGLKQPPQAIHLLQNNTRESMSPGSVTGMSPAYSEPSPDYSMLVNQNRLPRPSSNSPPINTAQNLNTTQHIAHNTPSTLMGQFIEVLNNQANLDDLNLNLESFQGGLDCNVDEVIKHELSYGPLDFNFQNNNQEGMVETINGGDAQQQHSTANHNHGVC
| Type | Start | End | Length |
| CDS |
35199 |
35206 |
8 |
| CDS |
35682 |
35811 |
130 |
| CDS |
35933 |
36054 |
122 |
| CDS |
36125 |
36284 |
160 |
| CDS |
36349 |
36484 |
136 |
| CDS |
37029 |
37253 |
225 |
| CDS |
38266 |
38356 |
91 |
| CDS |
38417 |
38630 |
214 |
| CDS |
49417 |
49625 |
209 |
| CDS |
52551 |
52767 |
217 |
| intron |
35207 |
35681 |
475 |
| intron |
35812 |
35932 |
121 |
| intron |
36055 |
36124 |
70 |
| intron |
36285 |
36348 |
64 |
| intron |
36485 |
37028 |
544 |
| intron |
37254 |
38265 |
1012 |
| intron |
38357 |
38416 |
60 |
| intron |
38631 |
49416 |
10786 |
| intron |
49626 |
52550 |
2925 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
ABK76646 |
forkhead box subgroup O [Aedes aegypti] |
1e-153 |
| InterPro |
IPR011991 |
Winged helix-turn-helix transcription repressor DNA-binding |
|
| InterPro |
IPR001766 |
Transcription factor, fork head |
|
| InterPro |
IPR018122 |
Transcription factor, fork head, conserved site |
|
| Gene Ontology(BP) |
GO:0006355 |
regulation of transcription, DNA-dependent |
|
| Gene Ontology(MF) |
GO:0043565 |
sequence-specific DNA binding |
|
| Gene Ontology(MF) |
GO:0003700 |
sequence-specific DNA binding transcription factor activity |
|
| Pfam |
PF00250.13 |
Fork head domain |
1.1e-22 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| N. vitripennis |
NV14158-PA |
| A. gambiae |
AGAP001577 |
| H. melpomene |
HMEL002929-PA |
| P. vanderplanki |
Pv.03061 |
| T. castaneum |
TC001063 |
| P. humanus |
PHUM222030-PA |
| A. aegypti |
AAEL012847 |
| A. mellifera |
GB13873-PA |
| D. plexippus |
DPOGS208863PA |
| C. quinquefasciatus |
CPIJ016794 |
| S. invicta |
SI2.2.0_04492 |
| B. mori |
BGIBMGA008094-TA |
| D. melanogaster |
FBgn0038197 |