MidgeBase gene description page [Pn.01314]
Outline
| Gene ID | Pn.01314 |
| Type | Protein coding gene |
| Scaffold | PnScaf1264 |
| Start | 56316 |
| End | 57003 |
| Direction | + |
Sequence
Transcript: 561 (bp)
ATGGCGAGTCGAATGATGGCATTAGCTCTGCGTCATCAACCAGCCGCATCAAAGACTTCTTTGATCGTCCGCGCTGCTCACTCAGGCACGGTGAATCCTCATCTTGCTGAGAAGTTAGAGAAGATCGGCAACCGCGATGTTGTTGGTTTTGGCTGGAACGGCGAAGCTACATATTACGACAGACCTGATTTCCCAATGCCAGCTATCCGCTTCAAGGAAAACACTCCAGACGTCTTGGCTCTGAGAGCAAAGGAAAAGGAGGACTGGAAGAAGCTCTCACTTCAAGAAAAGAAAGCTCTTTATCGCGCATCATTCTGTCAAACTTTCGCCGAAATGAAATACCCAACAGGCGAATGGAAAATGCATGTTGGCAACACCCTCATTGTTTTCGCGTTAGCTATCTACATCTCATTGTGGATGGCCACCTTTATCTACGACCCAGATCCCGAATCGTTCAGCGAAGCCAACCAAAAGGCACAACTTAAACGTATGCTCACATTGGAAGTCAATCCGATCCACGGTTTGTCGTCCAAATGGGACTACGAAAACAAGAGATGGAAG
Protein: 187 (aa)
MASRMMALALRHQPAASKTSLIVRAAHSGTVNPHLAEKLEKIGNRDVVGFGWNGEATYYDRPDFPMPAIRFKENTPDVLALRAKEKEDWKKLSLQEKKALYRASFCQTFAEMKYPTGEWKMHVGNTLIVFALAIYISLWMATFIYDPDPESFSEANQKAQLKRMLTLEVNPIHGLSSKWDYENKRWK
| Type | Start | End | Length |
| CDS |
56316 |
56552 |
237 |
| CDS |
56616 |
56808 |
193 |
| CDS |
56870 |
57000 |
131 |
| intron |
56553 |
56615 |
63 |
| intron |
56809 |
56869 |
61 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
ABV44710 |
cytochrome C oxidase subunit IV-like protein [Phlebotomus papatasi] |
1e-60 |
| InterPro |
IPR004203 |
Cytochrome c oxidase subunit IV family |
|
| InterPro |
IPR013288 |
Cytochrome c oxidase subunit IV |
|
| Gene Ontology(MF) |
GO:0004129 |
cytochrome-c oxidase activity |
|
| Pfam |
PF02936.9 |
Cytochrome c oxidase subunit IV |
2.8e-51 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| S. invicta |
SI2.2.0_07228 |
| H. sapiens |
ENSP00000457513 |
| A. aegypti |
AAEL013009 |
| P. vanderplanki |
Pv.08297 |
| D. plexippus |
DPOGS201113PA |
| M. musculus |
ENSMUSG00000031818 |
| B. mori |
BGIBMGA013680-TA |
| N. vitripennis |
NV11058-PA |
| H. sapiens |
ENSP00000457015 |
| H. melpomene |
HMEL017985-PA |
| D. melanogaster |
FBgn0032833 |
| P. humanus |
PHUM248180-PA |
| A. gambiae |
AGAP008727 |
| T. castaneum |
TC009512 |
| A. aegypti |
AAEL005170 |
| H. sapiens |
ENSP00000253452 |
| C. quinquefasciatus |
CPIJ004823 |
| A. mellifera |
GB20012-PA |
| P. humanus |
PHUM227990-PA |
| D. melanogaster |
FBgn0033020 |