MidgeBase gene description page [Pn.01279]
Outline
| Gene ID | Pn.01279 |
| Type | Protein coding gene |
| Scaffold | PnScaf1239 |
| Start | 25247 |
| End | 26191 |
| Direction | + |
Sequence
Transcript: 861 (bp)
ATGGATTCTTGCAACTGCGAGAATTTTATCGAGACACACAATTCAATTCATTATGATGTACAGAATAGAAAATATTACGATTCGGTCATTGATAAGTTCAAAAATAAGAAAAAATTAGCAATAATTGTACCATTCAGAGATAGATTCGACGAATTGCTCGAGTTCGCGCCGCATATGAGCAAATTTTTGAATGATCAACAAATTCCTCACCATATCTTTGTCATCAATCAAGTTGACCGTTATCGTTTTAATCGAGCTTCGTTGATAAATGCTGGTTTTCTACATACAAAAGGCAATTTTGACTACTTTGCTATGCACGACGTTGATTTATTGCCACTAAACAAAGATCTGAAATACGACTATCCCGAAAACGATGGCGTTCTTCATATCGCAGCACCGGGCCTTCATCCCAAATATAATTATCCTTCGTTTATTGGAGGTATATTGCTTCTGAGGAACGAGCACTTTGAGCGAGTTAATGGTCTATCAAATCGCTATTGGGGCTGGGGACTGGAGGACGACGAGTTCTTTGTGAGACTAAAGGACGTAGAGCTCAAGATTTATCGTCCACTGAACATTACTACCGACATGACTAATACTTTTGTGCATAATCACGATCGAACACACCGGCGTCGCGACACGCAAAAGTGTTATAATCAAAAGGAAGAGACTCGCAGACGCGACAAGAAAACTGGATTAAATACGTTAAAATACAGTATCAATTCACGAAAGGAACTCACAATTGATGGGATAAAATTAACAGTTCTTAATGTCAAACTCGAGTGTGATAAAAACTCAACTCCATGGTGTGAGTGCAAGGATATACCAAAAGAGTCGAAGCCTAAAGCGAAGAAAGTACGT
Protein: 287 (aa)
MDSCNCENFIETHNSIHYDVQNRKYYDSVIDKFKNKKKLAIIVPFRDRFDELLEFAPHMSKFLNDQQIPHHIFVINQVDRYRFNRASLINAGFLHTKGNFDYFAMHDVDLLPLNKDLKYDYPENDGVLHIAAPGLHPKYNYPSFIGGILLLRNEHFERVNGLSNRYWGWGLEDDEFFVRLKDVELKIYRPLNITTDMTNTFVHNHDRTHRRRDTQKCYNQKEETRRRDKKTGLNTLKYSINSRKELTIDGIKLTVLNVKLECDKNSTPWCECKDIPKESKPKAKKVR
| Type | Start | End | Length |
| CDS |
25247 |
25250 |
4 |
| CDS |
25332 |
26188 |
857 |
| intron |
25251 |
25331 |
81 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
EFR19069 |
hypothetical protein AND_23112 [Anopheles darlingi] |
1e-103 |
| InterPro |
IPR003859 |
Galactosyltransferase, metazoa |
|
| Gene Ontology(BP) |
GO:0005975 |
carbohydrate metabolic process |
|
| Gene Ontology(MF) |
GO:0016757 |
transferase activity, transferring glycosyl groups |
|
| Pfam |
PF13733.1 |
N-terminal region of glycosyl transferase group 7 |
2.6e-24 |
| Pfam |
PF02709.9 |
N-terminal domain of galactosyltransferase |
2.6e-24 |
| Pfam |
PF12344.3 |
Ultra-violet resistance protein B |
0.79 |
| Pfam |
PF10111.4 |
Glycosyltransferase like family 2 |
1.4e-07 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| D. melanogaster |
FBgn0039258 |
| C. quinquefasciatus |
CPIJ802127 |
| M. musculus |
ENSMUSG00000021504 |
| B. mori |
BGIBMGA010796-TA |
| P. humanus |
PHUM457130-PA |
| A. aegypti |
AAEL007895 |
| A. mellifera |
GB10470-PA |
| H. melpomene |
HMEL016897-PA |
| H. sapiens |
ENSP00000029410 |
| P. vanderplanki |
Pv.03050 |
| B. mori |
BGIBMGA010795-TA |
| N. vitripennis |
NV17801-PA |
| D. plexippus |
DPOGS206283PA |
| T. castaneum |
TC012167 |