MidgeBase gene description page [Pn.01276]
Outline
| Gene ID | Pn.01276 |
| Type | Protein coding gene |
| Scaffold | PnScaf1239 |
| Start | 20554 |
| End | 21012 |
| Direction | - |
Sequence
Transcript: 456 (bp)
ATGCGTGCAGGGTTGAGCCCACCCAAAGTTACCTACAGCGATTTGATTGCCACAACACCATTCGAAAATAGCATTTTCCTAGTGGATCTTCCGGGAATAGCGTTGAGAGAAGCTTTAGAGCTTGCCGTTGCAAACACAGAGAAACTCCATATGGTGCAAGTGTCAGGAATCAAAGTTACTTATGACCTCGGCCGTGAACCTTATGACAGAATCGTCGATCTGAAAGTTCTCTGTCAAGCGTGCCAAATCCCAAAGTACGAACCGATTGATGACGCAAAGGAGTATAAAGTGGTTCTTACTGACTACATTCTTGATGGTGGAGATCGATTTACAATGTTTCCGAAGTATGCAAAGAATCCCATCAAAGGTGTCAAAGACATTGATGCATTGAGTAGTTATATTGAAAAAATGTCACCTTTGAACTTGCCACCGACAATTAATCGCATCACATTTATT
Protein: 152 (aa)
MRAGLSPPKVTYSDLIATTPFENSIFLVDLPGIALREALELAVANTEKLHMVQVSGIKVTYDLGREPYDRIVDLKVLCQACQIPKYEPIDDAKEYKVVLTDYILDGGDRFTMFPKYAKNPIKGVKDIDALSSYIEKMSPLNLPPTINRITFI
| Type | Start | End | Length |
| CDS |
20557 |
21012 |
456 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
ADD20435 |
5'-nucleotidase family salivary protein [Glossina morsitans morsitans] |
5e-26 |
| InterPro |
IPR008334 |
5'-Nucleotidase, C-terminal |
|
| InterPro |
IPR006179 |
5'-Nucleotidase/apyrase |
|
| Gene Ontology(BP) |
GO:0009166 |
nucleotide catabolic process |
|
| Gene Ontology(MF) |
GO:0016787 |
hydrolase activity |
|
| Pfam |
PF02872.13 |
5'-nucleotidase, C-terminal domain |
4.8e-24 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes