MidgeBase gene description page [Pn.01202]
Outline
| Gene ID | Pn.01202 |
| Type | Protein coding gene |
| Scaffold | PnScaf1176 |
| Start | 8549 |
| End | 9211 |
| Direction | - |
Sequence
Transcript: 378 (bp)
ATGGCTTCAAGACTTTACAGCGCACTCGTCGCCTTTGCTGACCCGAAAGTTCCTCAGAAGCTTCGACCACTTTGGAATCATCCCGCCGGTCCGAAGACGATCTTCTTCTGGGCTCCAGTATTCAAATGGGGTCTCGTGTTGGCAGGACTTAAAGACTTGAGCAGACCAGCCGATCAACTCTCCGTCAGTCAATCAGCGTCGCTCGCTGCAACCGGCATCATTTGGTCGCGCTACTCGCTGGTCATCATCCCGAAGAACTATGGACTTTTCTCGGTGAATCTTTTCGTCGGACTCACGCAAATCATTCAGCTCTACCGTGCATGGGCCTGCCAAAAGGCGAAGGACGAATTGCTGGCAATTGAAGCCGCGCCGGCCAAG
Protein: 126 (aa)
MASRLYSALVAFADPKVPQKLRPLWNHPAGPKTIFFWAPVFKWGLVLAGLKDLSRPADQLSVSQSASLAATGIIWSRYSLVIIPKNYGLFSVNLFVGLTQIIQLYRAWACQKAKDELLAIEAAPAK
| Type | Start | End | Length |
| CDS |
8552 |
8800 |
249 |
| CDS |
9013 |
9023 |
11 |
| CDS |
9094 |
9211 |
118 |
| intron |
8801 |
9012 |
212 |
| intron |
9024 |
9093 |
70 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001863428 |
conserved hypothetical protein [Culex quinquefasciatus] gb|EDS38555.1| conserved hypothetical protein [Culex quinquefasciatus] |
3e-44 |
| InterPro |
IPR005336 |
Uncharacterised protein family UPF0041 |
|
| Pfam |
PF03650.8 |
Uncharacterised protein family (UPF0041) |
1.3e-36 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| C. quinquefasciatus |
CPIJ013355 |
| H. sapiens |
ENSP00000356820 |
| D. melanogaster |
FBgn0037714 |
| P. vanderplanki |
Pv.03317 |
| S. invicta |
SI2.2.0_15736 |
| D. plexippus |
DPOGS209778PA |
| A. gambiae |
AGAP004906 |
| M. musculus |
ENSMUSG00000026568 |
| H. sapiens |
ENSP00000392874 |
| P. humanus |
PHUM335300-PA |
| C. quinquefasciatus |
CPIJ005268 |
| A. mellifera |
GB19433-PA |
| H. melpomene |
HMEL014895-PA |
| N. vitripennis |
NV16385-PA |
| D. melanogaster |
FBgn0037715 |
| B. mori |
BGIBMGA010102-TA |
| H. sapiens |
ENSP00000271373 |
| T. castaneum |
TC004964 |
| A. aegypti |
AAEL009278 |