MidgeBase gene description page [Pn.01153]
Outline
| Gene ID | Pn.01153 |
| Type | Protein coding gene |
| Scaffold | PnScaf1117 |
| Start | 61 |
| End | 947 |
| Direction | - |
Sequence
Transcript: 753 (bp)
ATGGAAATACAAATTAGGCACGAGGATAAGCCTTACACAATTGCAGAAATTTGTATAGCAATTTTTGTGGTGATGGCTAATTGCTTAGTTCTTGTGGCATTTTGCATTGAGCGAGGCTTAAGAACTCGAGTGTATTATTTTGTTCTGTCATTGTCAATTATTGATCTCCTCACAGGGTTGATCGCGATTCCACTTTCAATATACGTAAGATTTTGTGCCACGACTAAAAATGAGCAGAGCTCATTCACACTCATTCACACGCAGGTCGACGACGAGCTGATTAGAAGCAAACACACATGCTTAATTGTGATATCGACGTTTATTGCATTCTTCTCCATGTCAAAATGGGGTGTAGCGGCCATCGCATGCAACTGCTATTGGGCCATCGTGCATCCTCTCCATTATCACTGCAACAACCATAAAGTGCCAGTAAAGGTCATAGTGGGAACATGTTGGATAATCGGCTTAGTGATTGGCACTCTACCTGTTGCTGGCTGGCACAAGAGTATAGAAAAGTGCACATTTTTCGATGTGGTCGAGGATAATTACATTTACTTTTATTACTCATTCGATACGCTCCTTCCGACGCTGATTCTGATGGTCTTGTACGGATTAATAATTTGCGAAATTCGAAGAGTAATTTTAATGAAGTTGCTAATTAATGTGCCCATCATTGATGTATCTTTGCAAACTCTTATTAGAAACGGCGAAGAACAGCCGATGAGGCTGGCATCCGGAGAACGATTATTCGTG
Protein: 251 (aa)
MEIQIRHEDKPYTIAEICIAIFVVMANCLVLVAFCIERGLRTRVYYFVLSLSIIDLLTGLIAIPLSIYVRFCATTKNEQSSFTLIHTQVDDELIRSKHTCLIVISTFIAFFSMSKWGVAAIACNCYWAIVHPLHYHCNNHKVPVKVIVGTCWIIGLVIGTLPVAGWHKSIEKCTFFDVVEDNYIYFYYSFDTLLPTLILMVLYGLIICEIRRVILMKLLINVPIIDVSLQTLIRNGEEQPMRLASGERLFV
| Type | Start | End | Length |
| CDS |
64 |
380 |
317 |
| CDS |
447 |
501 |
55 |
| CDS |
567 |
947 |
381 |
| intron |
381 |
446 |
66 |
| intron |
502 |
566 |
65 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001981237 |
GG11961 [Drosophila erecta] gb|EDV53107.1| GG11961 [Drosophila erecta] |
3e-25 |
| InterPro |
IPR017452 |
GPCR, rhodopsin-like superfamily |
|
| InterPro |
IPR000276 |
GPCR, rhodopsin-like, 7TM |
|
| Gene Ontology(BP) |
GO:0007186 |
G-protein coupled receptor signaling pathway |
|
| Gene Ontology(CC) |
GO:0016021 |
integral to membrane |
|
| Pfam |
PF10316.4 |
Serpentine type 7TM GPCR chemoreceptor Srbc |
2.1 |
| Pfam |
PF00001.16 |
7 transmembrane receptor (rhodopsin family) |
4.7e-23 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes