MidgeBase gene description page [Pn.01152]
Outline
| Gene ID | Pn.01152 |
| Type | Protein coding gene |
| Scaffold | PnScaf1113 |
| Start | 2413 |
| End | 5037 |
| Direction | + |
Sequence
Transcript: 1521 (bp)
ATGGGACTGATTTTACCGTTGATCGGCTTCGTCGCCCTTTTCTGCTTCATCTACGCGCTCATTGACGCGTACCCGAAGATCAAGCTCGACATTCCGTCGCCGCCATCGATTCCCATCATCGGACACTTGCACAAGGTGATTGGACTCAACACCGAGGACCAGCTGAAGTTGGCGCAGGAGTACGCGAGCGGCTCAGTAAAACTAATGAAGTTTTGGTTCTTCAACATCATGGCGATCGCGCCGGGCACGCCCGAGATGTTCCAGCGCATCCTAAACGCGGAAGAGTGCATGGAGAAGCCATTTATTGCCTACCGCCTGCTCGCCCTCAACAACGGCCTGCTCGCGTCGCGCTTTCATCGCTGGCAGCGCGACCGAAAGTTCTTCAACAACTCCTTCAAGATGTCGACGCTGCAGAGCTTTCTGCCCATTTTCAACGACGCCGCCGAGCGCATCGTGCTCGACATGCGCGGAAACCTCGACGGAAAGACGTTCAACGTGTCGCCTTACATCTTCAAGTGCACGCTCAAGATGATCTGCTCGACGTCGCTCGGCATGCAAATCAATGATGTGGACAATGACGAGTCCTTCGATAAGATCTATCATGCCGTCAACTACGTCATCGAGTCGATCGCGTCGCTCCAGAACAAGCCGATAATCTTCCCGGAGACGCTCTACCTCCTCACGCCGCGCGCCTGGAAGCACCTGGCGTCGGCGCTCTACCTGCGCAACTTCCACTACCGCATCATGAACGAGCGGCGCCGCCACCTCAACGACGGCGATACGAAAAGGAGCGACGACGACGCGCCCACGTACGACATCTTCATCGACCAGATCCTGAAGAATCGCGGCCAGTTCACGGACCGCGAGATCTGGGAGCACGTGTTGACGATCCTGGCAGCCGGCTACGAGACGTCGGCCACCTGCCTCTCGCACTGCATGCTCTTCCTCGCCATCTTCCCCGACATCCAGCAGAAGGTTGTCGACGAGATCGACGCGGTCTTTCCGACGCGCGACACCGAGGTGACGGTCGAGAGCCTCGGCCGGCTGCAGTACATGGAGCGCGTCATCAAGGAGACACTGCGCATCGCGCCCGTCGGCCCCGTCGTCTTCCGCGAGACGCGCCAGCCCTTCGAGATCGAGCCCGGCCTCGTCATCCCCAAGGGCGTCGTCTTCATCATCCACATCTACTGCCTGCACCGCTCGAAGCGATGGTGGGGCGAGCGCGCCGAGGAGTTCGACCCGGACAACTTTCTGCCCGAGCGGGTCGCGGCACGCCATCCGGCATGCTTCATCCCCTTCAGCTTCGGCAAGCGCAACTGCATCGGCTACCGCTACGCGATGCTCTCGATGAAGACGATCCTGCTGCGCATGCTGCAGAGCTACAAGTTCTCCACGCACCTCAAGTACGAGGGGCTGCGCTTCAAGTCCACGCTCACGCTGCAGCTGATCGGGGAGCATGCCGTGCAGATCGAGGAGAGGCCACCGAGGACAACCGGGGGTGAGGGCGAAAGTGTCGATGAG
Protein: 507 (aa)
MGLILPLIGFVALFCFIYALIDAYPKIKLDIPSPPSIPIIGHLHKVIGLNTEDQLKLAQEYASGSVKLMKFWFFNIMAIAPGTPEMFQRILNAEECMEKPFIAYRLLALNNGLLASRFHRWQRDRKFFNNSFKMSTLQSFLPIFNDAAERIVLDMRGNLDGKTFNVSPYIFKCTLKMICSTSLGMQINDVDNDESFDKIYHAVNYVIESIASLQNKPIIFPETLYLLTPRAWKHLASALYLRNFHYRIMNERRRHLNDGDTKRSDDDAPTYDIFIDQILKNRGQFTDREIWEHVLTILAAGYETSATCLSHCMLFLAIFPDIQQKVVDEIDAVFPTRDTEVTVESLGRLQYMERVIKETLRIAPVGPVVFRETRQPFEIEPGLVIPKGVVFIIHIYCLHRSKRWWGERAEEFDPDNFLPERVAARHPACFIPFSFGKRNCIGYRYAMLSMKTILLRMLQSYKFSTHLKYEGLRFKSTLTLQLIGEHAVQIEERPPRTTGGEGESVDE
| Type | Start | End | Length |
| CDS |
2413 |
2569 |
157 |
| CDS |
2935 |
3391 |
457 |
| CDS |
4128 |
5034 |
907 |
| intron |
2570 |
2934 |
365 |
| intron |
3392 |
4127 |
736 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001655568 |
cytochrome P450 [Aedes aegypti] gb|EAT48676.1| cytochrome P450 [Aedes aegypti] |
2e-80 |
| InterPro |
IPR001128 |
Cytochrome P450 |
|
| InterPro |
IPR017972 |
Cytochrome P450, conserved site |
|
| InterPro |
IPR002401 |
Cytochrome P450, E-class, group I |
|
| Gene Ontology(BP) |
GO:0055114 |
oxidation-reduction process |
|
| Gene Ontology(MF) |
GO:0009055 |
electron carrier activity |
|
| Gene Ontology(MF) |
GO:0020037 |
heme binding |
|
| Gene Ontology(MF) |
GO:0016705 |
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
|
| Gene Ontology(MF) |
GO:0005506 |
iron ion binding |
|
| Pfam |
PF00931.17 |
NB-ARC domain |
0.15 |
| Pfam |
PF00067.17 |
Cytochrome P450 |
2.4e-82 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
| Gene ID |
| Pn.00462 |
| Pn.16004 |
| Pn.16449 |
| Pn.12660 |
Orthologous genes
| Species |
Gene ID |
| D. melanogaster |
FBgn0038006 |
| A. aegypti |
AAEL012770 |
| A. aegypti |
AAEL012762 |
| C. quinquefasciatus |
CPIJ015953 |
| C. quinquefasciatus |
CPIJ800272 |
| A. aegypti |
AAEL015591 |
| A. aegypti |
AAEL012773 |
| A. aegypti |
AAEL011761 |
| D. melanogaster |
FBgn0038005 |
| D. melanogaster |
FBgn0038076 |
| D. melanogaster |
FBgn0038007 |
| A. aegypti |
AAEL011769 |
| C. quinquefasciatus |
CPIJ017200 |
| P. vanderplanki |
Pv.11616 |
| A. gambiae |
AGAP002197 |
| C. quinquefasciatus |
CPIJ800271 |
| P. vanderplanki |
Pv.09794 |
| A. gambiae |
AGAP002195 |
| D. melanogaster |
FBgn0038236 |
| P. vanderplanki |
Pv.08578 |
| A. aegypti |
AAEL012769 |
| P. vanderplanki |
Pv.11619 |
| A. aegypti |
AAEL012765 |
| C. quinquefasciatus |
CPIJ800296 |
| D. melanogaster |
FBgn0037601 |