MidgeBase gene description page [Pn.01148]
Outline
| Gene ID | Pn.01148 |
| Type | Protein coding gene |
| Scaffold | PnScaf1112 |
| Start | 798 |
| End | 5503 |
| Direction | - |
Sequence
Transcript: 1770 (bp)
ATGTTTTTTCGCCCACTGAACGCATGCGAGAGGAGATCGAGAGTGTTTGTGGGCATTTCTCACTTGTTGAAGCAACGGTCGAAATTTCTACACTTCATATGCATCTCCTCATTTTTGGATGAAAGGAAAAGTGATTACATCGCGGCGACTCGTTTCTATCGTATCCACTCGCTTACACGCTCACTCGCCGCTATGAGGCAAAACGTACGCAAGACCAACGTCGTCTTTCTATCGGTTGGCGTGATTTTGGTCGTTGCCGGTGTGAGCATTGTGATCTTTTGGCCCATTGTTTTCATCTCAATTCTCGGGAAGCAACTCAGTCTGAGCGCCACATCAAAGACATACGAAGAATGGAAGCAACCGAGCGTGGAGCTCTATCTCGACGTCTATTTATTTAATTGGACTAACTCAGAGAGCTTTGTCTTCCCCAATTTCGAGAAGCCCATTATGAAAGAGCACGGTCCGTATCGCTTCCGAGAGGTTCGCGACAAAGTGAAAATAAAGTTCAATGACAACAACTCGACAGTCAGCTACCGGCAATTCAACTCGTACGAGTTTATTGAAGAGGAGAGCAGTGGATCGCTCGACGACATGATAACGAATTTGAACATGGTGGCGATCGGAGCGGCTGTGAAGTCGCAAACCTACGACTATCACAACCGGAAGGTAATTTCGACGGTGCTCAACGGCTACTACGAGGAGGACATTTTCGTGACAAAATCTGTCCGCGAGCTGCTGTTCGAGGGCTACGAGGATGACATGGTGACGATGGGACGAACAGTCGAAATCGCCGGTTTTGACATGAAGCAAATTCCCTACGACAAAGTTGGCTGGTTTTATCTGCGCAATGCGACGGACAAGATGAGCGGCCGCTTCAACGTGCACACGGGCAGAGGCGACGGCTCGAAGCTCGGCCTCATTCGACGCTTCAACGATCTCGACCACATTCCACAGTATACGGGCGAGTGCTCGAGACTTCAAGGCTCCACCGGCGAGTTCTTCCCGCCAGGCAGGAAACGTGACTCAATTCGGTTGTTTGCGCCCGACATGTGTCGATCGATTCCTTTTGACTACGATGCAGACGTGAGCATTCACGGCGTTCGAGGCTACCGCTATGTTGCCGGTAAACGTGCCATTGACAACGGCACTGAATTCCCCGAAAATCTTTGCTACAGTCCGGGACGTGCAGAGGAGGCTCCGTCGGGGGTCATGAACATCTCGGCATGTAAATTCTCGTCGCCCATCTACATGTCCTATCCACACTTTCTCGACGCCGATCCGTCTTACTTGGAAGGCGTCGACGGCCTCGTTTCCGACGAGAAAAGGCACAGATCGCACATCACTCTCGAACCGCTGTCGGGCATTCCGCTCGAGGTTGTGATCAGATTCCAAGCGAATTTCTTGGTGCAGCACATCGAGGACATTGCGCTGTATCAGGACCATCCCAAAGTCTACATTCCCGCCATGTGGGTCGAGCAGAAGTTCTTGATCGACGAGTCGATGACGGAGCAGCTGAAATTTGCGCTGAAAGTTCCGACGATCGGCCAGCTTCTTGGCGTGATAATCTTTGCCCTGGGCGTCGCACTTGTTGTCATTTCTTGCATCATCCGGTGCGCAAAAGGCAGAAACTCGAGCGCAAATGAGCAAGGTGTGAATTTGCCCGAAGTGAAGCCCTCAATAAATCGCCGACAAAAGGAGACTTCGTCGCCGCTGCTCGACGCAAACGGAAAGCCCAAAGTAGTTGTTAAGAAAATGAACAAAGGTGCTGAA
Protein: 590 (aa)
MFFRPLNACERRSRVFVGISHLLKQRSKFLHFICISSFLDERKSDYIAATRFYRIHSLTRSLAAMRQNVRKTNVVFLSVGVILVVAGVSIVIFWPIVFISILGKQLSLSATSKTYEEWKQPSVELYLDVYLFNWTNSESFVFPNFEKPIMKEHGPYRFREVRDKVKIKFNDNNSTVSYRQFNSYEFIEEESSGSLDDMITNLNMVAIGAAVKSQTYDYHNRKVISTVLNGYYEEDIFVTKSVRELLFEGYEDDMVTMGRTVEIAGFDMKQIPYDKVGWFYLRNATDKMSGRFNVHTGRGDGSKLGLIRRFNDLDHIPQYTGECSRLQGSTGEFFPPGRKRDSIRLFAPDMCRSIPFDYDADVSIHGVRGYRYVAGKRAIDNGTEFPENLCYSPGRAEEAPSGVMNISACKFSSPIYMSYPHFLDADPSYLEGVDGLVSDEKRHRSHITLEPLSGIPLEVVIRFQANFLVQHIEDIALYQDHPKVYIPAMWVEQKFLIDESMTEQLKFALKVPTIGQLLGVIIFALGVALVVISCIIRCAKGRNSSANEQGVNLPEVKPSINRRQKETSSPLLDANGKPKVVVKKMNKGAE
| Type | Start | End | Length |
| CDS |
801 |
1217 |
417 |
| CDS |
1284 |
1793 |
510 |
| CDS |
1863 |
2393 |
531 |
| CDS |
2725 |
2953 |
229 |
| CDS |
5421 |
5503 |
83 |
| intron |
1218 |
1283 |
66 |
| intron |
1794 |
1862 |
69 |
| intron |
2394 |
2724 |
331 |
| intron |
2954 |
5420 |
2467 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_314281 |
AGAP003373-PA [Anopheles gambiae str. PEST] gb|EAA09639.4| AGAP003373-PA [Anopheles gambiae str. PEST] |
1e-107 |
| InterPro |
IPR002159 |
CD36 antigen |
|
| Gene Ontology(BP) |
GO:0007155 |
cell adhesion |
|
| Gene Ontology(CC) |
GO:0016020 |
membrane |
|
| Pfam |
PF11271.3 |
Protein of unknown function (DUF3068) |
0.13 |
| Pfam |
PF04156.9 |
IncA protein |
0.55 |
| Pfam |
PF01130.16 |
CD36 family |
8.3e-133 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.04508 |