MidgeBase gene description page [Pn.01031]
Outline
| Gene ID | Pn.01031 |
| Type | Protein coding gene |
| Scaffold | PnScaf1035 |
| Start | 8539 |
| End | 9946 |
| Direction | - |
Sequence
Transcript: 984 (bp)
ATGTTAATATCGTTATTCTTCACATTCCATGTACTGTTGTATGATTCAACGATTTATTCTATCCAGGCAGCAACAATAATTTCAAATAATAAAATAGTACCAACGATATCATCGAGAATCAAAAAGCAAATAAAATTTTCACCATATCGCATACATTTCCCGAGGACAAGTAGAAAACTTCCGCAATGCTTAATAATTGGTGTCAGAAAATGTGGCACTCGTGCATTGTTAGAAATGTTACATCTGCATCCACGAATTCAAAAGTCGGCTAGTGAACTTCATTTCTTTGACCGAGACGAAAACTATTCAAAAGGTCTTGAGTGGTATCGGAAAAAAATGCCTCACAGTTTCAATGGACAAATTACTATTGAGAAAAGTCCAAGCTACTTTGTGACACCTGAAGTTGCCGAAAGAGTCAGAGCAATGAATTCATCAATTAAGTTATTGTTAATAGTTAGGGAGCCAGTTACAAGAGCAATATCTGATTTCACTCAGCTTCGTAGTCACTCGGCTACCGCAGTTCTTCCTACCAATTTGCAAGCATCATCTTCATCTCCGAGCACAAAGTCTTTTGAGGAATTAGCAATTTTTGCTAACGGAACCATCAATATTAATTACCGGCCACTTGCATTGTCAATCTATCATCAATATACAATAAGGTGGCTAGAAATTTTCTCAAGATCACAGATTTTAGTAATTAACGGAGATCAGCTAATCACAAACCCATTGTCACAGATAAATAGAGTCCAAGATTTTCTCGGAATAGAACGTCGCATAAATAGCGAAAATTTCTACTTCAACAAGACAAAAGGCTTTTATTGTCTCCGAACAGAACTGGGTGATAAAAAGTGCTTGAAAGAGACGAAAGGCAGAGCTCATCCAAAGGTGACGCCGTCAAGTATTTCAAAACTGAGAAAGTTTTTCGTAGAACACAACCAAAAGTTCTACGACCTCATCGGAGAGGATTTAGGGTGGCCGGAAGAA
Protein: 328 (aa)
MLISLFFTFHVLLYDSTIYSIQAATIISNNKIVPTISSRIKKQIKFSPYRIHFPRTSRKLPQCLIIGVRKCGTRALLEMLHLHPRIQKSASELHFFDRDENYSKGLEWYRKKMPHSFNGQITIEKSPSYFVTPEVAERVRAMNSSIKLLLIVREPVTRAISDFTQLRSHSATAVLPTNLQASSSSPSTKSFEELAIFANGTININYRPLALSIYHQYTIRWLEIFSRSQILVINGDQLITNPLSQINRVQDFLGIERRINSENFYFNKTKGFYCLRTELGDKKCLKETKGRAHPKVTPSSISKLRKFFVEHNQKFYDLIGEDLGWPEE
| Type | Start | End | Length |
| CDS |
8542 |
8555 |
14 |
| CDS |
8623 |
8937 |
315 |
| CDS |
9034 |
9122 |
89 |
| CDS |
9191 |
9354 |
164 |
| CDS |
9420 |
9635 |
216 |
| CDS |
9699 |
9818 |
120 |
| CDS |
9881 |
9946 |
66 |
| intron |
8556 |
8622 |
67 |
| intron |
8938 |
9033 |
96 |
| intron |
9123 |
9190 |
68 |
| intron |
9355 |
9419 |
65 |
| intron |
9636 |
9698 |
63 |
| intron |
9819 |
9880 |
62 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001867352 |
heparan sulfate sulfotransferase [Culex quinquefasciatus] gb|EDS44842.1| heparan sulfate sulfotransferase [Culex quinquefasciatus] |
1e-134 |
| InterPro |
IPR000863 |
Sulfotransferase domain |
|
| Gene Ontology(MF) |
GO:0008146 |
sulfotransferase activity |
|
| Pfam |
PF00685.22 |
Sulfotransferase domain |
3.8e-36 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| A. mellifera |
GB16750-PA |
| B. mori |
BGIBMGA006776-TA |
| P. humanus |
PHUM056180-PA |
| D. melanogaster |
FBgn0053147 |
| M. musculus |
ENSMUSG00000044499 |
| S. invicta |
SI2.2.0_07269 |
| H. melpomene |
HMEL012277-PA |
| H. sapiens |
ENSP00000440332 |
| A. aegypti |
AAEL001458 |
| C. quinquefasciatus |
CPIJ017207 |
| H. sapiens |
ENSP00000427888 |
| P. vanderplanki |
Pv.11651 |
| N. vitripennis |
NV11754-PA |
| T. castaneum |
TC011833 |
| A. gambiae |
AGAP006169 |
| D. plexippus |
DPOGS213821PA |