MidgeBase gene description page [Pn.00984]
Outline
| Gene ID | Pn.00984 |
| Type | Protein coding gene |
| Scaffold | PnScaf987 |
| Start | 29619 |
| End | 30596 |
| Direction | - |
Sequence
Transcript: 786 (bp)
ATGGAGGTCTCGAGGAACATTCAGATGCTGCAGAATGTCGACGCTGAGGACATCAAAAAATTCAACGCTTTTGCCAAGGATTGGTGGGATCTCAAAGGGTCGCAGCATGGACTTCACGACATGAACAACGTGAGGGTTCCGTGGGTGCGCGACGGCCTCATTGACACGAAAGTTCTGAGCGAAAGCGTGCGTGACAAGCCAAATGCCCTCGAGGGAGCCGTCATTCTCGACGTTGGCTGTGGCGGAGGAATTTTGTCGGAAGCCCTCGGGCGCCTCGGCGCCACAGTTGTCGGCCTCGACGCAGCAGTGAAGCTCATCGAGCTCGCCCAGCACCACCTCGAGCCGCAGAAGGAGATCCGCGATCGCGTGTCGTACGTGTGCGAGACGATCGAGGAGCACTGCGAGAAGAACCCGGAAAAGTACGACGCAGTCGTGGCCAGCGAGGTGATCGAGCACATCCTCGACAAGGAGTCCTTCCTCGAGGCCTGCGTGAAGGCGCTCAAGCCCGGCGGCAGCATCTTCATCTCCACGCCCAACCGCACCTTCGTCTCGTGGTTCTGCTCGAAGCTGATGGGCGAGTACGTGCTGAGAGTCATCGAGCAGGGAACGCACGACTTCAACCTCTTCATCAAGCCCAAAAATGTGTCGAAAATTCTCGAGAAGTTCGACTGCAAGACGGTCTCGGTGAAGGGAATGCGCTACGACTTGCACAGACGACAAAACAAGTGGCAGTTCCAAGACTACCTCGGCTTCTCGTACGCGCTGCAGGCAGTGAAGGAGAAGAAG
Protein: 262 (aa)
MEVSRNIQMLQNVDAEDIKKFNAFAKDWWDLKGSQHGLHDMNNVRVPWVRDGLIDTKVLSESVRDKPNALEGAVILDVGCGGGILSEALGRLGATVVGLDAAVKLIELAQHHLEPQKEIRDRVSYVCETIEEHCEKNPEKYDAVVASEVIEHILDKESFLEACVKALKPGGSIFISTPNRTFVSWFCSKLMGEYVLRVIEQGTHDFNLFIKPKNVSKILEKFDCKTVSVKGMRYDLHRRQNKWQFQDYLGFSYALQAVKEKK
| Type | Start | End | Length |
| CDS |
29622 |
30178 |
557 |
| CDS |
30368 |
30596 |
229 |
| intron |
30179 |
30367 |
189 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001649843 |
hexaprenyldihydroxybenzoate methyltransferase [Aedes aegypti] gb|EAT43765.1| hexaprenyldihydroxybenzoate methyltransferase [Aedes aegypti] |
2e-66 |
| InterPro |
IPR010233 |
Ubiquinone biosynthesis O-methyltransferase |
|
| Gene Ontology(BP) |
GO:0006744 |
ubiquinone biosynthetic process |
|
| Gene Ontology(MF) |
GO:0008425 |
2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity |
|
| Pfam |
PF08242.7 |
Methyltransferase domain |
9.8e-16 |
| Pfam |
PF01209.13 |
ubiE/COQ5 methyltransferase family |
1.5e-07 |
| Pfam |
PF08003.6 |
Protein of unknown function (DUF1698) |
0.0083 |
| Pfam |
PF02349.10 |
Major surface glycoprotein |
0.023 |
| Pfam |
PF12847.2 |
Methyltransferase domain |
1.4e-17 |
| Pfam |
PF01555.13 |
DNA methylase |
0.075 |
| Pfam |
PF13489.1 |
Methyltransferase domain |
1.2e-20 |
| Pfam |
PF13847.1 |
Methyltransferase domain |
9.5e-18 |
| Pfam |
PF13659.1 |
Methyltransferase domain |
2.6e-08 |
| Pfam |
PF06325.8 |
Ribosomal protein L11 methyltransferase (PrmA) |
1.2e-08 |
| Pfam |
PF13679.1 |
Methyltransferase domain |
0.0016 |
| Pfam |
PF01135.14 |
Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) |
0.024 |
| Pfam |
PF09445.5 |
RNA cap guanine-N2 methyltransferase |
0.012 |
| Pfam |
PF05175.9 |
Methyltransferase small domain |
6.7e-07 |
| Pfam |
PF02353.15 |
Mycolic acid cyclopropane synthetase |
1.1e-08 |
| Pfam |
PF05891.7 |
AdoMet dependent proline di-methyltransferase |
6.7e-07 |
| Pfam |
PF08241.7 |
Methyltransferase domain |
1.3e-17 |
| Pfam |
PF13649.1 |
Methyltransferase domain |
7.8e-10 |
| Pfam |
PF05401.6 |
Nodulation protein S (NodS) |
1.9e-05 |
| Pfam |
PF00398.15 |
Ribosomal RNA adenine dimethylase |
0.00023 |
| Pfam |
PF02390.12 |
Putative methyltransferase |
0.00082 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
| Gene ID |
| Pn.00983 |
| Pn.15131 |
| Pn.15130 |
| Pn.09087 |
Orthologous genes
| Species |
Gene ID |
| P. humanus |
PHUM106910-PA |
| M. musculus |
ENSMUSG00000028247 |
| B. mori |
BGIBMGA011466-TA |
| D. plexippus |
DPOGS209147PA |
| D. melanogaster |
FBgn0032922 |
| S. invicta |
SI2.2.0_15460 |
| P. vanderplanki |
Pv.11671 |
| T. castaneum |
TC004041 |
| H. melpomene |
HMEL010030-PA |
| C. quinquefasciatus |
CPIJ011660 |
| H. sapiens |
ENSP00000254759 |
| A. aegypti |
AAEL004804 |
| A. gambiae |
AGAP010537 |
| A. mellifera |
GB15622-PA |
| H. melpomene |
HMEL008052-PA |
| N. vitripennis |
NV12168-PA |