MidgeBase gene description page [Pn.00942]
Outline
| Gene ID | Pn.00942 |
| Type | Protein coding gene |
| Scaffold | PnScaf946 |
| Start | 15391 |
| End | 17134 |
| Direction | + |
Sequence
Transcript: 804 (bp)
ATGGCGCTAGTTCTAAGGAAAATCTACGATGGCTACACTTACTACTTCTACCAGATTAAAGACGAACGCTCGCAGGATTTCTTTCTCATCACGAATCCGCCGATTCCGTTCGCCCTCATCCTCATCGGCTACGTTCTGATGGTGCGCTACGGACCCAAACTTATGAAATCGCGCGAGCCCTTCGACCTCAAGTACATCATGATGCTCTACAACTTCTTTCAAGTCGCTCTGAATGCCGTTATTGCGACAAAGGCCGTCTACGAAATCTTCTATGTAAATCCGATAGACTTGGAGTGCGAAAACTCCGACTACAGCAACACCGAGCGAGGACTAACGCAATTGCGTCTGACGTACTGCTACTTCCTACTGAAAGTTCTTGACCTCTTCGATACGCTCTTCATCATTCTGAAGAAGAAAGACTCGCATCTGTCATTTCTGCACTGCTACCATCACTTCTTCATGGCCTTGGGCGTCTACATTGCTGTCCGATGGGTGCCCGGCGGTCACTCTTCGATGCTCGGAATCATCAACAGCTACGTGCACGCATTCATGTACACTTACTACTTCGTGGCTGCGTTCAGGCCCGAGCTCAAAAAGTCCATCTGGTGGAAGAAATACATCACTCAAGTGCAGCTCATTCAGTTCGCCTTCCTGCTCATCCACTACCTGCGCGGTGCGCTGTCATCGAAGTGCACGTACCCGAAGTTCTGGCTGTGGGTGATGGTCATCCAGAATGTCTTCATGCTGACGCTCTTCGGCGACTTTTACTTCAAGACGTACATTCGAAAGCGCGAAAAGAAGCAG
Protein: 268 (aa)
MALVLRKIYDGYTYYFYQIKDERSQDFFLITNPPIPFALILIGYVLMVRYGPKLMKSREPFDLKYIMMLYNFFQVALNAVIATKAVYEIFYVNPIDLECENSDYSNTERGLTQLRLTYCYFLLKVLDLFDTLFIILKKKDSHLSFLHCYHHFFMALGVYIAVRWVPGGHSSMLGIINSYVHAFMYTYYFVAAFRPELKKSIWWKKYITQVQLIQFAFLLIHYLRGALSSKCTYPKFWLWVMVIQNVFMLTLFGDFYFKTYIRKREKKQ
| Type | Start | End | Length |
| CDS |
15391 |
15451 |
61 |
| CDS |
15510 |
15700 |
191 |
| CDS |
16282 |
16422 |
141 |
| CDS |
16546 |
16633 |
88 |
| CDS |
16731 |
16885 |
155 |
| CDS |
16964 |
17131 |
168 |
| intron |
15452 |
15509 |
58 |
| intron |
15701 |
16281 |
581 |
| intron |
16423 |
16545 |
123 |
| intron |
16634 |
16730 |
97 |
| intron |
16886 |
16963 |
78 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001663734 |
elongase, putative [Aedes aegypti] gb|EAT34192.1| elongase, putative [Aedes aegypti] |
2e-62 |
| InterPro |
IPR002076 |
GNS1/SUR4 membrane protein |
|
| Gene Ontology(CC) |
GO:0016021 |
integral to membrane |
|
| Pfam |
PF01151.13 |
GNS1/SUR4 family |
3.7e-60 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| A. aegypti |
AAEL013542 |
| C. quinquefasciatus |
CPIJ016815 |
| A. gambiae |
AGAP003196 |
| P. vanderplanki |
Pv.17313 |
| A. gambiae |
AGAP013219 |