MidgeBase gene description page [Pn.00891]
Outline
| Gene ID | Pn.00891 |
| Type | Protein coding gene |
| Scaffold | PnScaf880 |
| Start | 17647 |
| End | 21567 |
| Direction | - |
Sequence
Transcript: 705 (bp)
ATGACTCCTCGAAGTCGATCAATAGAATTGCTCCGAAGTGCTTTTAGTATGGCGCCAATCGTCTTGTATCACTTTCCACCATCGGCACCTTCACGAATCGCTCTGCTTGCCATCCGCAATCTGGATCTGGATGTGGAGGTCAAGCACGTGAATTTGTTTGCCAAGGAGCAATTAGCACCGGATTTCATCCGAATGAACCCGCAACATACGGTTCCCACTTTGGACGACAATGGCTTTTATCTGTGGGAGTCTCGAGCAATCGCACAGTACTTGGTCGAGACAAGAGCTCCCAAAAGCCAGCTCTATCCGTCGGATCCGAAGGAACGTGCTCTGGTGAATCAACGTCTGTATTTTGATGCGAGCACTCTCTATCCGAGAGTTCGTGCAATTGCTTACCCGGCGCTGTTCTTGGGCGAGAAGAAGATTGCGGACGAGAAGCGCAATCACATACACGACGCATTCACTTTTATGGAGAACTTCCTCGAAGGCCGAAAATGGTTTTGCGGAGACACCATGACAATCGCCGACCTCTCCATTCTGGCGTCGATCTCATCAATCATTCACATCGGGGCGTCGCTCCACAACTACCCGAATCTCAGGCGCTGGTACGAGCAGTGCGGCACCGACGTCAAAGGCTACGCGGAGAACGACGAAGGAGCGAAGATTTTCGGCGAGCGCGTCAGGAGCCTCCTCGACGACAAATTC
Protein: 235 (aa)
MTPRSRSIELLRSAFSMAPIVLYHFPPSAPSRIALLAIRNLDLDVEVKHVNLFAKEQLAPDFIRMNPQHTVPTLDDNGFYLWESRAIAQYLVETRAPKSQLYPSDPKERALVNQRLYFDASTLYPRVRAIAYPALFLGEKKIADEKRNHIHDAFTFMENFLEGRKWFCGDTMTIADLSILASISSIIHIGASLHNYPNLRRWYEQCGTDVKGYAENDEGAKIFGERVRSLLDDKF
| Type | Start | End | Length |
| CDS |
17650 |
17793 |
144 |
| CDS |
17868 |
18035 |
168 |
| CDS |
19297 |
19433 |
137 |
| CDS |
19548 |
19665 |
118 |
| CDS |
19728 |
19830 |
103 |
| CDS |
21533 |
21567 |
35 |
| intron |
17794 |
17867 |
74 |
| intron |
18036 |
19296 |
1261 |
| intron |
19434 |
19547 |
114 |
| intron |
19666 |
19727 |
62 |
| intron |
19831 |
21532 |
1702 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
ADK66961 |
glutathione s-transferase [Chironomus riparius] |
1e-111 |
| InterPro |
IPR010987 |
Glutathione S-transferase, C-terminal-like |
|
| InterPro |
IPR004046 |
Glutathione S-transferase, C-terminal |
|
| InterPro |
IPR017933 |
Glutathione S-transferase/chloride channel, C-terminal |
|
| InterPro |
IPR012336 |
Thioredoxin-like fold |
|
| InterPro |
IPR004045 |
Glutathione S-transferase, N-terminal |
|
| Gene Ontology(MF) |
GO:0005515 |
protein binding |
|
| Pfam |
PF13409.1 |
Glutathione S-transferase, N-terminal domain |
3.8e-08 |
| Pfam |
PF13410.1 |
Glutathione S-transferase, C-terminal domain |
8.9e-08 |
| Pfam |
PF02798.15 |
Glutathione S-transferase, N-terminal domain |
8.7e-15 |
| Pfam |
PF13417.1 |
Glutathione S-transferase, N-terminal domain |
3.4e-14 |
| Pfam |
PF00043.20 |
Glutathione S-transferase, C-terminal domain |
2e-10 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| A. aegypti |
AAEL010500 |
| A. gambiae |
AGAP009342 |
| P. vanderplanki |
Pv.01023 |
| T. castaneum |
TC009482 |
| P. humanus |
PHUM097960-PA |
| C. quinquefasciatus |
CPIJ014694 |
| P. vanderplanki |
Pv.14640 |
| D. plexippus |
DPOGS210477PA |