MidgeBase gene description page [Pn.00889]
Outline
| Gene ID | Pn.00889 |
| Type | Protein coding gene |
| Scaffold | PnScaf876 |
| Start | 65 |
| End | 5521 |
| Direction | + |
Sequence
Transcript: 1134 (bp)
ATGTTTTGCTTTAGTCGACAGGGATGCATTCATGGCGAGGATCTGCCGTACTTTTTCGGAGCACCACTCGTTGGTGGCCTCAGCCACTTTACCAAGAACTACACAAAGGCCGAGATTCTTCTATCCGAGGCCGTCATGAACTACTGGTCCAATTTCGTCAGAACCGGGAATCCAAACGAGCAGCAGGATAATCGCGACAGGAAGGCGAAAAACATCGAGTGGACGCCATACGAGAATGTTCACAAAAAGTACCTCAATATCGACACAAAGCCGAAGTTGAAGAATCACTATCGTGCTCATCGGCTATCTTTCTGGCTGAATCTCATCCCAGATCTTCATAAGCCGGGCAACGATGACGTGCCGCTGTCGCATCACGAGCTGGAAAACGATGACGTCATCGATCAGAGCAAGTCGACGGTGAAGCCGCTGACGCCACAGCGCACGAACGGAACAATGAACGGCACGACGACGTCTTCGGGCGGCATGCCGTCGCTCTTCCCCGACTACAACAAGCTGTACGACAAGAGCCGCAACAACAGCAGCGTCAACAACGCGCAGATGAACGCGAATCTGGGCAGCAGCAAGACGAAAAATCCCGTGCCCGGCATCGACCACGACATGTACGACGAGAATGCCACCAACAATCCGCCAACGGAGGACGGCTTCGCCGCCTACAGCACTGCCCTGAGCGTCACCATCGCCATCGGCTGCAGCCTGCTAATCCTCAACGTGCTCATCTTCGCCGGCGTTTATTACCAGCGCGACAAGACGCGCCTCAACGAGCCGCGCACGCTGAAGAAGCGCAACGAGAATGGCCAGATGCCGAACAATATCTGCGGGGATCTCGAGACGCTCACGATCCACTCAAAGAGCGACCCGGCAACGATCCTCGGCCACCATCACTCACTTCATCAGCTGCCGCCGCCCGAGTTCGCCGACATGCCGCTGATCACGAAGCCGTCGAGTCGAATTCCGCCGCCACCGCATGCCTTACAGGTCGGCAGCAACTGCAATACGCTCAACAAGAAGAGCTGCGTGAAGAACAACATGAACCACCAGCATCAGCATCAGGGAGCGCCGAATGCCGGCGGCAACTCGACCGCACAGCAGAATCCCATGGACGAGCTGCGTGTA
Protein: 378 (aa)
MFCFSRQGCIHGEDLPYFFGAPLVGGLSHFTKNYTKAEILLSEAVMNYWSNFVRTGNPNEQQDNRDRKAKNIEWTPYENVHKKYLNIDTKPKLKNHYRAHRLSFWLNLIPDLHKPGNDDVPLSHHELENDDVIDQSKSTVKPLTPQRTNGTMNGTTTSSGGMPSLFPDYNKLYDKSRNNSSVNNAQMNANLGSSKTKNPVPGIDHDMYDENATNNPPTEDGFAAYSTALSVTIAIGCSLLILNVLIFAGVYYQRDKTRLNEPRTLKKRNENGQMPNNICGDLETLTIHSKSDPATILGHHHSLHQLPPPEFADMPLITKPSSRIPPPPHALQVGSNCNTLNKKSCVKNNMNHQHQHQGAPNAGGNSTAQQNPMDELRV
| Type | Start | End | Length |
| CDS |
65 |
79 |
15 |
| CDS |
1433 |
1584 |
152 |
| CDS |
1650 |
1744 |
95 |
| CDS |
4647 |
5518 |
872 |
| intron |
80 |
1432 |
1353 |
| intron |
1585 |
1649 |
65 |
| intron |
1745 |
4646 |
2902 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001848663 |
conserved hypothetical protein [Culex quinquefasciatus] gb|EDS28805.1| conserved hypothetical protein [Culex quinquefasciatus] |
1e-121 |
| InterPro |
IPR002018 |
Carboxylesterase, type B |
|
| Pfam |
PF00135.23 |
Carboxylesterase family |
3.7e-13 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
| Gene ID |
| Pn.07905 |
| Pn.07239 |
Orthologous genes
| Species |
Gene ID |
| H. sapiens |
ENSP00000370485 |
| A. gambiae |
AGAP003568 |
| P. humanus |
PHUM165950-PA |
| H. sapiens |
ENSP00000370482 |
| N. vitripennis |
NV12794-PA |
| H. sapiens |
ENSP00000407960 |
| M. musculus |
ENSMUSG00000051790 |
| H. sapiens |
ENSP00000348169 |
| P. humanus |
PHUM447140-PA |
| H. sapiens |
ENSP00000379196 |
| H. sapiens |
ENSP00000410374 |
| S. invicta |
SI2.2.0_12628 |
| C. quinquefasciatus |
CPIJ011308 |
| C. quinquefasciatus |
CPIJ012197 |
| D. melanogaster |
FBgn0083963 |
| H. sapiens |
ENSP00000305288 |
| A. gambiae |
AGAP003115 |
| S. invicta |
SI2.2.0_09844 |
| H. sapiens |
ENSP00000445298 |
| H. sapiens |
ENSP00000439203 |
| M. musculus |
ENSMUSG00000031302 |
| D. plexippus |
DPOGS200016PA |
| H. sapiens |
ENSP00000370483 |
| N. vitripennis |
NV50581-PA |
| A. aegypti |
AAEL004357 |
| N. vitripennis |
NV16744-PA |
| B. mori |
BGIBMGA002173-TA |
| B. mori |
BGIBMGA002180-TA |
| S. invicta |
SI2.2.0_13237 |
| H. sapiens |
ENSP00000363163 |
| A. mellifera |
GB13939-PA |
| H. sapiens |
ENSP00000275857 |
| B. mori |
BGIBMGA006082-TA |
| D. plexippus |
DPOGS214902PA |
| P. humanus |
PHUM221080-PA |
| D. plexippus |
DPOGS201833PA |
| M. musculus |
ENSMUSG00000063887 |
| A. gambiae |
AGAP011916 |
| P. vanderplanki |
Pv.01470 |
| A. aegypti |
AAEL003138 |
| H. melpomene |
HMEL010854-PA |
| S. invicta |
SI2.2.0_14566 |
| H. sapiens |
ENSP00000354541 |
| T. castaneum |
TC013963 |
| H. sapiens |
ENSP00000372325 |
| H. sapiens |
ENSP00000461168 |
| H. sapiens |
ENSP00000385750 |
| P. vanderplanki |
Pv.02969 |
| B. mori |
BGIBMGA002185-TA |
| H. sapiens |
ENSP00000441108 |
| H. melpomene |
HMEL013971-PA |
| H. sapiens |
ENSP00000372320 |
| A. aegypti |
AAEL017095 |
| H. sapiens |
ENSP00000392500 |
| H. sapiens |
ENSP00000351591 |
| A. mellifera |
GB18290-PA |
| A. mellifera |
GB18836-PA |
| D. melanogaster |
FBgn0083975 |
| C. quinquefasciatus |
CPIJ007493 |
| T. castaneum |
TC010467 |
| H. melpomene |
HMEL004528-PA |
| T. castaneum |
TC013956 |
| H. melpomene |
HMEL012004-PA |
| H. sapiens |
ENSP00000342535 |
| D. plexippus |
DPOGS211435PA |
| H. melpomene |
HMEL012004-PB |