MidgeBase gene description page [Pn.00732]
Outline
| Gene ID | Pn.00732 |
| Type | Protein coding gene |
| Scaffold | PnScaf760 |
| Start | 16293 |
| End | 16848 |
| Direction | + |
Sequence
Transcript: 489 (bp)
ATGACGTGCTGGAAATTATTTTTTTGTCTCATTGTTGCTTCAATAATCATAAGAAACTGCGACGGAAAGCCAGCAGCTCATCCATCCACCAGTAATGAATTCGTCTCAACTCCTTTGACCAAGAAGAACTACAAGGCAATTCTGAGCACAAACAAATACGTCTTTGTGAAATTTTTCACTGATTGGTGCGCGTTCAGCAAGAAAATCCTCCAAATTTGGGAGAATGTTGGTGAGCACTTCGAATCCTCGGAGGACATCCTGATTGCAGAGATCGACTGCGGAAAGTACAAGCCTGTGTGTCAGGGTTTCAATGTACGAGAGTATCCGACGCTACTAATTTTCAAGGACGGAAAACGGTTCGAAAGATACATCGGGCCACGCACAACGAAGGACATGGTGGATTACATTGAAAAATTCATTGCTAAGAGAAAAATTAAAGACGCGCAAGAAAACATCAATCGCGAGCTGCAGCAGCCGCCGCCGCCGCAA
Protein: 163 (aa)
MTCWKLFFCLIVASIIIRNCDGKPAAHPSTSNEFVSTPLTKKNYKAILSTNKYVFVKFFTDWCAFSKKILQIWENVGEHFESSEDILIAEIDCGKYKPVCQGFNVREYPTLLIFKDGKRFERYIGPRTTKDMVDYIEKFIAKRKIKDAQENINRELQQPPPPQ
| Type | Start | End | Length |
| CDS |
16293 |
16477 |
185 |
| CDS |
16542 |
16845 |
304 |
| intron |
16478 |
16541 |
64 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_311114 |
AGAP000044-PA [Anopheles gambiae str. PEST] gb|EAA06539.4| AGAP000044-PA [Anopheles gambiae str. PEST] |
2e-19 |
| InterPro |
IPR012336 |
Thioredoxin-like fold |
|
| InterPro |
IPR013766 |
Thioredoxin domain |
|
| Gene Ontology(BP) |
GO:0045454 |
cell redox homeostasis |
|
| Pfam |
PF13098.1 |
Thioredoxin-like domain |
0.00026 |
| Pfam |
PF13905.1 |
Thioredoxin-like |
0.01 |
| Pfam |
PF13778.1 |
Domain of unknown function (DUF4174) |
0.039 |
| Pfam |
PF00085.15 |
Thioredoxin |
1.7e-21 |
| Pfam |
PF05510.8 |
Sarcoglycan alpha/epsilon |
0.12 |
| Pfam |
PF07912.8 |
ERp29, N-terminal domain |
0.0031 |
| Pfam |
PF13102.1 |
Protein of unknown function (DUF3946) |
0.022 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.12061 |