MidgeBase gene description page [Pn.00625]
Outline
| Gene ID | Pn.00625 |
| Type | Protein coding gene |
| Scaffold | PnScaf687 |
| Start | 6545 |
| End | 8435 |
| Direction | - |
Sequence
Transcript: 1551 (bp)
ATGAAGCTGAAAGCTTGGCTGGTGTTTTTTATTTCTTCACTCACTGCTTGCGAGTCGTCGAAAATTTTATTTATTTGTGCATCGCTGAGTCGGTCTCATGTACTCCCACTGCAAGTGTTGGCCAAGGCATTGATTGAGCGAGACCATGAAGTTACGTTTGTGTCGGCATTTCCACTCGGGCAATCGATGAAAAATTACCGAGAAATCAAAATAAACGTCGACGATGAAGACACGAAGTCAGTTGACCAGGTGATAAAGTTGATGAGTCAAAATCCGTCTGCGAAAAACTTTGCGACTCTGTTTAGACTGTTCACAACGACTTTTTACAAAATTGGCAACGACACCTTGAATTCCGCCGATGTACAGCGTCTGATGAGAGAAGAGTCGTTTGACCTTGTGCTCTCTGGGTATTTCATGTCCGAGTATATGCTCGGTTTGGCCGATCACTTCAAGTGCCCCTCAGTTGTCTTTTTTTCGGGAAGCTACATGGGATCTGTGAATAAAATGGTCGGTAATCCAGCGGCGCCCACAGGAGCGTCGCATACATTGCACGGCAACAGAGATCTCAGCTCTTTCGTTTCGCGCCTGAAGAATTTCATCATAAACGGCGTCGATTTGCTTGTCATGCGGCCTTACTTCAATTATCGGGCGAAACTTATCTACGATGAAAATTTCCCAGCAGATCAATATCGGTCGTATGAGGAGTCTCTGAGGAACATTTCGCTGGTGCTTATCAACACTCACTTCTCATCGGTGGGACCGAGGCCGAACTTACCGAACATGGTTGAAGTGGGAGGACTTCAAATCAATCCCAAGCCTTTGCCACTGCCAGCTGACATGAAGGAGTTCCTCGACAACGCGAAGGACGGTGCCATCATCTTCAGTCTCGGATCGAACGCCAAGAGTATTTACATAGCCGAAGAGAAGATCAACGCTCTCCTCAAAGTGTTTTCGAAGCTCAAGCAGCGCGTCGTGATGAAATGGGAGTCAGAAACCATGCCTGGAAAGCCGGACAACGTCCTCATCAGCAAATGGCTGCCGCAGTCCGATGTTCTTGCGCACCCAAACATCAAGCTCTTCATCTCACACTGCGGCTTTGGTGGCGTGGTGGAGGCCATGCACAGCGGTGTGCCCATCATAGGCATTCCGCTGGGCGGCGATCAGTCCAGCAATGCCGACAAGATCGTGAAGGAAGGCTGGGCGATTCGCATCGATTACGACGACGTGAATGAGCAGACGCTGAGCAGCGCCATCAGTGAGATTTTGAGCAATCGAAAGTATGGCGATGTCGTCAAGAGGGAGTCACTTCTGCTTCGAGACCGCCCGCTCAATGCTCAGGACACGGCCGTCTACTGGATTGAGTACGTTTTGCGACACCACGGCGCTCCTCATCTGCACTACCCTGCCGCCGATTTGAACTTCCTGCAGGAGAACTCTGTTGATGTCGTCGTCGTGATCATGTGCGTGCTTTACCTGGCGTGGCAGCTTTTGAAAAGAATTTGCCGTTTCATCTTTTGCAGACGAAAGAAAACTCAAAAGTTGAAGAGAAAC
Protein: 517 (aa)
MKLKAWLVFFISSLTACESSKILFICASLSRSHVLPLQVLAKALIERDHEVTFVSAFPLGQSMKNYREIKINVDDEDTKSVDQVIKLMSQNPSAKNFATLFRLFTTTFYKIGNDTLNSADVQRLMREESFDLVLSGYFMSEYMLGLADHFKCPSVVFFSGSYMGSVNKMVGNPAAPTGASHTLHGNRDLSSFVSRLKNFIINGVDLLVMRPYFNYRAKLIYDENFPADQYRSYEESLRNISLVLINTHFSSVGPRPNLPNMVEVGGLQINPKPLPLPADMKEFLDNAKDGAIIFSLGSNAKSIYIAEEKINALLKVFSKLKQRVVMKWESETMPGKPDNVLISKWLPQSDVLAHPNIKLFISHCGFGGVVEAMHSGVPIIGIPLGGDQSSNADKIVKEGWAIRIDYDDVNEQTLSSAISEILSNRKYGDVVKRESLLLRDRPLNAQDTAVYWIEYVLRHHGAPHLHYPAADLNFLQENSVDVVVVIMCVLYLAWQLLKRICRFIFCRRKKTQKLKRN
| Type | Start | End | Length |
| CDS |
6548 |
7264 |
717 |
| CDS |
7537 |
7705 |
169 |
| CDS |
7771 |
8435 |
665 |
| intron |
7265 |
7536 |
272 |
| intron |
7706 |
7770 |
65 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001687884 |
AGAP007589-PA [Anopheles gambiae str. PEST] gb|EDO64533.1| AGAP007589-PA [Anopheles gambiae str. PEST] |
1e-130 |
| InterPro |
IPR002213 |
UDP-glucuronosyl/UDP-glucosyltransferase |
|
| Gene Ontology(BP) |
GO:0008152 |
metabolic process |
|
| Gene Ontology(MF) |
GO:0016758 |
transferase activity, transferring hexosyl groups |
|
| Pfam |
PF00534.15 |
Glycosyl transferases group 1 |
0.0025 |
| Pfam |
PF03033.15 |
Glycosyltransferase family 28 N-terminal domain |
0.013 |
| Pfam |
PF13439.1 |
Glycosyltransferase Family 4 |
0.087 |
| Pfam |
PF13528.1 |
Glycosyl transferase family 1 |
1.5e-09 |
| Pfam |
PF00201.13 |
UDP-glucoronosyl and UDP-glucosyl transferase |
2.7e-73 |
| Pfam |
PF04101.11 |
Glycosyltransferase family 28 C-terminal domain |
2e-10 |
| Pfam |
PF08241.7 |
Methyltransferase domain |
0.11 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
| Gene ID |
| Pn.12834 |
| Pn.00963 |
Orthologous genes
| Species |
Gene ID |
| A. aegypti |
AAEL001548 |
| D. melanogaster |
FBgn0040260 |
| N. vitripennis |
NV17755-PA |
| D. melanogaster |
FBgn0026754 |
| P. vanderplanki |
Pv.11966 |
| D. melanogaster |
FBgn0026756 |
| D. melanogaster |
FBgn0040262 |
| D. melanogaster |
FBgn0026755 |
| N. vitripennis |
NV14700-PA |
| C. quinquefasciatus |
CPIJ000225 |
| D. melanogaster |
FBgn0040261 |
| A. aegypti |
AAEL001533 |
| D. melanogaster |
FBgn0038083 |
| A. aegypti |
AAEL001586 |
| P. vanderplanki |
Pv.01701 |
| C. quinquefasciatus |
CPIJ000226 |
| D. melanogaster |
FBgn0038082 |
| A. gambiae |
AGAP011564 |
| C. quinquefasciatus |
CPIJ012943 |
| A. gambiae |
AGAP007589 |
| A. gambiae |
AGAP007588 |