MidgeBase gene description page [Pn.00596]
Outline
| Gene ID | Pn.00596 |
| Type | Protein coding gene |
| Scaffold | PnScaf651 |
| Start | 3191 |
| End | 4959 |
| Direction | - |
Sequence
Transcript: 948 (bp)
ATGTCGCGGAGTTTGCCGAAAAATATTGCGAAATTCAGCAAGGGCCAGCTCGAGGGCTTCCTGCAGTCGTTCGACACCGTCCTCACCGACTGCGATGGTGTCTTGTGGCTCTACAACAATGTCCTCGACGGAAGCAACACCGTCATCAACCGGCTCCTCGACATGGGCAAGAAGGTCTACTTCATCACCAACAACAGCACGAAGACGCGCGAGGAGCTGGCCGAGAAGGCGCGCGTCATGAACTTCAATGTTGGGCTTGACAACATGATATCGACCTCATACCTCGCCGCCCAATACCTGAAGGCCCAAAACTTCGACCAGAAAGTCTACATCGTGGGCAGCACGGGAGTGTCGCGGGAGCTCGACGCCATCGGCATCCGGCACACGGGCGTCGGCCCCGACCCAATCAGCGGCTCGCTGGCGACGCTCGTGAAGGAGCAGTTCAAGCCAGACCCGGACGTCGGCGCCGTCATTGTCGGGTTTGACGAGCACATCAGCTTCCCGAAGATGATGAAGGCGGCCACGTACCTGGACCGGCCGTCGACGCTCTTCGTCGCCACGAACACTGACGAGAGGTTTCCGATGCCGAACTTTGTCGTGCCCGGCACCGGGTCGATTGTGCGCGCCATCGAGACTTGTGCGGAGCGAAAGGCGGTTGTGATGGGAAAGCCCGAGAACTGGCTGTGCGAGATTTTCTTTAAAGACGAGATGAAAAGCGACAGCAGTCGCTTCCTTATGATCGGAGATCGCCTTAACACCGACATTCTGTTCGGCAAGAGAAACAACTTCCAGACACTCCTCGTCGAGACCGGCGTGCACAAGCTCGACAAGGTGCAAGAGATTATCGAAGAACTGGACGCGAGTGGCGTGAAGAACGAAGACCTGGAAAATCAAATTCCCGACTTCTATCTCGCGAAGCTGGGCGATCTTTTAGACAACTTGGAGACT
Protein: 316 (aa)
MSRSLPKNIAKFSKGQLEGFLQSFDTVLTDCDGVLWLYNNVLDGSNTVINRLLDMGKKVYFITNNSTKTREELAEKARVMNFNVGLDNMISTSYLAAQYLKAQNFDQKVYIVGSTGVSRELDAIGIRHTGVGPDPISGSLATLVKEQFKPDPDVGAVIVGFDEHISFPKMMKAATYLDRPSTLFVATNTDERFPMPNFVVPGTGSIVRAIETCAERKAVVMGKPENWLCEIFFKDEMKSDSSRFLMIGDRLNTDILFGKRNNFQTLLVETGVHKLDKVQEIIEELDASGVKNEDLENQIPDFYLAKLGDLLDNLET
| Type | Start | End | Length |
| CDS |
3194 |
3396 |
203 |
| CDS |
3702 |
3795 |
94 |
| CDS |
4045 |
4437 |
393 |
| CDS |
4555 |
4715 |
161 |
| CDS |
4863 |
4959 |
97 |
| intron |
3397 |
3701 |
305 |
| intron |
3796 |
4044 |
249 |
| intron |
4438 |
4554 |
117 |
| intron |
4716 |
4862 |
147 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001660159 |
4-nitrophenylphosphatase [Aedes aegypti] gb|EAT38614.1| 4-nitrophenylphosphatase [Aedes aegypti] |
1e-101 |
| InterPro |
IPR023215 |
Nitrophenylphosphatase-like domain |
|
| InterPro |
IPR006357 |
HAD-superfamily hydrolase, subfamily IIA |
|
| InterPro |
IPR006349 |
2-phosphoglycolate phosphatase, eukaryotic |
|
| InterPro |
IPR023214 |
HAD-like domain |
|
| Gene Ontology(BP) |
GO:0008152 |
metabolic process |
|
| Gene Ontology(MF) |
GO:0016787 |
hydrolase activity |
|
| Gene Ontology(MF) |
GO:0016791 |
phosphatase activity |
|
| Pfam |
PF13344.1 |
Haloacid dehalogenase-like hydrolase |
2.7e-28 |
| Pfam |
PF13242.1 |
HAD-hyrolase-like |
1.1e-11 |
| Pfam |
PF00702.21 |
haloacid dehalogenase-like hydrolase |
2.5e-06 |
| Pfam |
PF09419.5 |
Mitochondrial PGP phosphatase |
0.016 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| B. mori |
BGIBMGA011791-TA |
| N. vitripennis |
NV15597-PA |
| T. castaneum |
TC007560 |
| H. melpomene |
HMEL007781-PA |
| N. vitripennis |
NV15048-PA |
| P. vanderplanki |
Pv.13931 |
| A. mellifera |
GB12982-PA |
| D. plexippus |
DPOGS213511PA |
| P. humanus |
PHUM085690-PA |
| S. invicta |
SI2.2.0_01329 |
| H. sapiens |
ENSP00000457459 |
| A. aegypti |
AAEL009503 |
| H. sapiens |
ENSP00000330918 |
| C. quinquefasciatus |
CPIJ006772 |
| D. melanogaster |
FBgn0036760 |
| M. musculus |
ENSMUSG00000043445 |
| A. gambiae |
AGAP011350 |
| P. vanderplanki |
Pv.13443 |