MidgeBase gene description page [Pn.00538]
Outline
| Gene ID | Pn.00538 |
| Type | Protein coding gene |
| Scaffold | PnScaf601 |
| Start | 28834 |
| End | 30004 |
| Direction | - |
Sequence
Transcript: 510 (bp)
ATGCTGGGCCACATGCCGCTCCTCGGCGATCCATCATTCGCACAATTCTCACAAGAAATCGGTCTCGCGTCTTTGGGCGCGTCGGACGAGGAAATCGAGAAGCTCTCAACTGTCTACTGGTTCACAGTCGAGTTCGGCTTGTGCAAGGAGGAGAATCAGGTGAAGGCCTATGGCGCCGGTTTGCTGTCAGCTTACGGAGAGCTGTTGCACGCTGTCAGCGACAAGCCCGAACATCGAGCTTTCGACCCGGAGAAGACAGCCGTCCAGCCGTATCAGGATCAAGAGTACCAGCCGATCTACTACGTCGCCGAGAGCTTCGACGACGCCAAGGAGAAGTTCCGCCGATGGGTGGCCAACATGTCACGACCATTCGAGGTCCGCTTCAACCCGCACACCGAGCGCGTCGAGATTCTCGATTCGGTCGAGAAGCTGGAGGCATTAGTGTCGCAGCTCAACACAGAGATGCTCCACTTGACGAATGCAATCGAGAAGTTGAGGAAGCCGCTTCTT
Protein: 170 (aa)
MLGHMPLLGDPSFAQFSQEIGLASLGASDEEIEKLSTVYWFTVEFGLCKEENQVKAYGAGLLSAYGELLHAVSDKPEHRAFDPEKTAVQPYQDQEYQPIYYVAESFDDAKEKFRRWVANMSRPFEVRFNPHTERVEILDSVEKLEALVSQLNTEMLHLTNAIEKLRKPLL
| Type | Start | End | Length |
| CDS |
28837 |
29235 |
399 |
| CDS |
29894 |
30004 |
111 |
| intron |
29236 |
29893 |
658 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
EFR26584 |
hypothetical protein AND_07242 [Anopheles darlingi] |
3e-88 |
| InterPro |
IPR001273 |
Aromatic amino acid hydroxylase |
|
| InterPro |
IPR019774 |
Aromatic amino acid hydroxylase, C-terminal |
|
| Gene Ontology(BP) |
GO:0009072 |
aromatic amino acid family metabolic process |
|
| Gene Ontology(BP) |
GO:0055114 |
oxidation-reduction process |
|
| Gene Ontology(MF) |
GO:0005506 |
iron ion binding |
|
| Gene Ontology(MF) |
GO:0004497 |
monooxygenase activity |
|
| Gene Ontology(MF) |
GO:0016714 |
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen |
|
| Pfam |
PF00351.16 |
Biopterin-dependent aromatic amino acid hydroxylase |
4.5e-84 |
| Pfam |
PF04458.7 |
Protein of unknown function (DUF505) |
0.058 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| M. musculus |
ENSMUSG00000000214 |
| H. sapiens |
ENSP00000328814 |