MidgeBase gene description page [Pn.00489]
Outline
| Gene ID | Pn.00489 |
| Type | Protein coding gene |
| Scaffold | PnScaf525 |
| Start | 5297 |
| End | 7697 |
| Direction | - |
Sequence
Transcript: 1692 (bp)
ATGGTTGTTTCCGTGGAAGTTTCGTCTGAACAGGCTGTAGAAAATAACACCAATGGCGACGTCACACAAAAGAAGAAAAACTTGACCTACGGACTCGACGACATTCCGCCGTGGTACTTGTGCTTCTTCATGGCCATTCAGCACTATCTCACAATGATCGGAGCGATCGTCGCCATTCCGTTCATTCTGACACCCGCTCTGTGCATGGAGGACGAAAATCCGGCTCGCGGCACAATCATCTCGACCATGATCTTCGTCACGGGTCTCGTGACCATTTTCCAGGCGACCTTCGGATGCCGTTTGCCGCTGGTTCAAGGCGGCACGATAAGCTTCCTCGTGCCGACGCTCGCAATTCTAAATTTAGACAAGTGGCGGTGCCCCGACAAGTCTGTGATTGCCGCAATGAGCGCCGAGGACAAGGAAGAGCTCTGGCTGATAAGAATGAGAGAGCTGTCGGGCGCAATAATCATCGCTTCGCTCTTCCAAGTCTTTATTGGCTACACGGGACTGATCGGAAAGTTTTTGAAAATTATTTCGCCGCTTACGATCGTGCCAGCCGTGTCGCTAGTCGGAATAACGCTGTTCGAGCATGCCGCCGACACTGCTTCGAAAAATTGGTTCATTGCTGTGAGCACCACAACCCTCCTCACGCTTTTCTCTCAGATTCTCGTGAACGTAAAAGTTCCGACAATAACCTATCGAAAGGGATTTAAAATCATTTGGTTCGAACTCTTCAAGTTGTTTCCCGTGCTTTTAGCCATCTCGATTATGTGGCTCGTGTGCGGAATTTTGACGGCGACGGACGTCTTGGAGCCGGGAAGTCAAGCGCGCACGGACGTGAGGATCAAAGTTCTCGAGGATGCGCCTTGGTTTCGCATTCCCTATCCCTTTCAATTTGGCTGGCCGTCTTTTACACTGTCCGGCATTCTCGGCATGCTAGCCGGCGTTCTTGCCTGCACAGTGGAGTCTATTTCATATTATCCGACAGTTGCGACCATGTGTGAGGCTCAGTCGCCGCCTCTGCATGCCATTAATCGCGGCATCGGTACCGAAGGTCTCGGCTGTGTGTTGGCGGGCATGTGGGGTTGCGGCAACGGAACAAACACCTTCGGTGAAAATGTCGGCGCCATCGGTGTAACGAAGATCGGCTCGCGTAGAGTCATCCAGTGGGCGGCAGTGGTGATGTTGATTCAGGGTGTGTTTGGAAAACTCGGCGCGTGCTTCATCCTAATCCCGGATCCGGTCATCGGCGGCTGCTTTTGTACGATGTTTGGTCTGATAACGGCTTTTGGTCTGTCCGCACTGCAGTACGTTGATTTGCGGTCATCGCGGAACCTCTACATAATCGGCATTTCCCTGTTCTTCCCTCTCGTGCTGTGCCAGTGGATTCAGAAGCATCCGGGCGCGATCAACACGGGCGTCGAGATTTTGGACTCGACTCTCTCCGTTCTTCTCGGAACGAGCATTCTCGTGGGCGGCGTTCTCGGATGCTTTTTGGATCACGTTATTCCGGGAACGCCCGAGGAGCGCGGCATCGTAAAGTGGTCACGGCAGATGGAGCTCAAGGTCGACCAACAGCAGCCGTCTACCGAGAATTCGACCTACGATTTTCCGATCGGAATGGAGACACTCCGAAAGTGGAAATTTACCTACTACTTGCCGTTCTCGCCCACCTACAAGACGAAGAAGTTT
Protein: 564 (aa)
MVVSVEVSSEQAVENNTNGDVTQKKKNLTYGLDDIPPWYLCFFMAIQHYLTMIGAIVAIPFILTPALCMEDENPARGTIISTMIFVTGLVTIFQATFGCRLPLVQGGTISFLVPTLAILNLDKWRCPDKSVIAAMSAEDKEELWLIRMRELSGAIIIASLFQVFIGYTGLIGKFLKIISPLTIVPAVSLVGITLFEHAADTASKNWFIAVSTTTLLTLFSQILVNVKVPTITYRKGFKIIWFELFKLFPVLLAISIMWLVCGILTATDVLEPGSQARTDVRIKVLEDAPWFRIPYPFQFGWPSFTLSGILGMLAGVLACTVESISYYPTVATMCEAQSPPLHAINRGIGTEGLGCVLAGMWGCGNGTNTFGENVGAIGVTKIGSRRVIQWAAVVMLIQGVFGKLGACFILIPDPVIGGCFCTMFGLITAFGLSALQYVDLRSSRNLYIIGISLFFPLVLCQWIQKHPGAINTGVEILDSTLSVLLGTSILVGGVLGCFLDHVIPGTPEERGIVKWSRQMELKVDQQQPSTENSTYDFPIGMETLRKWKFTYYLPFSPTYKTKKF
| Type | Start | End | Length |
| CDS |
5300 |
5880 |
581 |
| CDS |
6210 |
6688 |
479 |
| CDS |
6789 |
6974 |
186 |
| CDS |
7252 |
7697 |
446 |
| intron |
5881 |
6209 |
329 |
| intron |
6689 |
6788 |
100 |
| intron |
6975 |
7251 |
277 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001846149 |
solute carrier family 23 member 2 [Culex quinquefasciatus] gb|EDS42686.1| solute carrier family 23 member 2 [Culex quinquefasciatus] |
0.0 |
| InterPro |
IPR006042 |
Xanthine/uracil permease |
|
| InterPro |
IPR006043 |
Xanthine/uracil/vitamin C permease |
|
| Gene Ontology(BP) |
GO:0006810 |
transport |
|
| Gene Ontology(BP) |
GO:0055085 |
transmembrane transport |
|
| Gene Ontology(CC) |
GO:0016020 |
membrane |
|
| Gene Ontology(MF) |
GO:0005215 |
transporter activity |
|
| Pfam |
PF00860.15 |
Permease family |
2.9e-82 |
| Pfam |
PF05529.7 |
B-cell receptor-associated protein 31-like |
0.0043 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| C. quinquefasciatus |
CPIJ003298 |
| P. humanus |
PHUM433690-PA |
| A. mellifera |
GB10902-PA |
| H. sapiens |
ENSP00000406601 |
| H. sapiens |
ENSP00000302701 |
| M. musculus |
ENSMUSG00000024354 |
| H. sapiens |
ENSP00000344322 |
| B. mori |
BGIBMGA003950-TA |
| D. plexippus |
DPOGS201145PA |
| P. vanderplanki |
Pv.17453 |
| D. melanogaster |
FBgn0037807 |
| M. musculus |
ENSMUSG00000027340 |
| N. vitripennis |
NV11256-PA |
| A. gambiae |
AGAP003176 |
| C. quinquefasciatus |
CPIJ802209 |
| A. aegypti |
AAEL016967 |
| M. musculus |
ENSMUSG00000029847 |
| H. sapiens |
ENSP00000368637 |
| H. sapiens |
ENSP00000302851 |
| H. melpomene |
HMEL014152-PA |
| H. sapiens |
ENSP00000396364 |
| S. invicta |
SI2.2.0_12584 |