MidgeBase gene description page [Pn.00432]
Outline
| Gene ID | Pn.00432 |
| Type | Protein coding gene |
| Scaffold | PnScaf459 |
| Start | 22329 |
| End | 28535 |
| Direction | - |
Sequence
Transcript: 1092 (bp)
ATGATGAAATTAACTTTCGCATTCATTTTGATCGCGATTGCCGCAGTCTGTGGAGATATCGCCAGCGAGAGTGAAGGGAATGAGCTGTTTGAGAGCTATTTGAAATTATTCGGCGTGAAAGTGGAGGAATATCAACGAAACGAAGCTAAGAGGAATTTTTTGAGGAATTACTTCGATGTCAGAAGCAACCGCTATCAAGGCTGGGAGTGGCATGAACCAATAGAATGCGGATCGAACTCGCTAACGAGGAAGAAAATCAACCAATATTTGCATCTTTCGGACTACGAGTGCTCGAGGCTGCAGAAATTAAATGAAAAGCGAAGAGTAATCGCAAAGCGAGCCGCGACCGACACATCACCGTCCTCATTTGTGCTTCCCGAGAATTTCAACTGGGTCGATAACGGCGTAGTGAGACCCGTGCAAAATCAGGGCCTGTGCTTGAGCTCGTACGCCTTTGCAGCTGTGGGAGCGATAGAAGGCCAGCTGTCGTTACTCGGCAACAACACAAAGCTCTCGGAGCAGGAGGTCGTCGATTGTGCACGGCATTATCTGTTCTTCTTTATTCCGGTCGTGCTCGGCTGTAATGGCGGCGATGACACTGCAGTTTACGGCTATGCATGGAAACACAACGGTCTTACGGCGGCCGAGAGTTATCCGTATCAGGGCAAGGTCAACTCGTGTCAAACGAACCGCGTGAAAGTGCAGGGCTCGAAAGTGCGGAGCTTCATCGACGTTCCAGCGGACGAGGAGATAATGAAGCAAGTGCTCTACACTCGCGGTCCATTGTACGTCACTCTGTATGCATCGCCGGCGTTCGCTTCCTATTCCGGAGGAATTTATTCGGATTCTCGGGGCGATTGCGCCGGAATGCAGAGCAATCATGCTGCTTTGCTGGTCGGCTATGGCGAGGAGAGCGGTCAAAAGTACTGGATTCTGAAGAATAGCTGGGGCGAAGGCTTCGGCGAGGGCGGATACGTGCGAGTCTCTCGCGGTGTTAACCTTTGTAACATCGCAGAGGAAGCCTCCTACCCGAACTTGCAGCAACGGCAGCAGCAGCGTCAGTACGGCGGAGTCAAATGCATTGCTGCAACG
Protein: 364 (aa)
MMKLTFAFILIAIAAVCGDIASESEGNELFESYLKLFGVKVEEYQRNEAKRNFLRNYFDVRSNRYQGWEWHEPIECGSNSLTRKKINQYLHLSDYECSRLQKLNEKRRVIAKRAATDTSPSSFVLPENFNWVDNGVVRPVQNQGLCLSSYAFAAVGAIEGQLSLLGNNTKLSEQEVVDCARHYLFFFIPVVLGCNGGDDTAVYGYAWKHNGLTAAESYPYQGKVNSCQTNRVKVQGSKVRSFIDVPADEEIMKQVLYTRGPLYVTLYASPAFASYSGGIYSDSRGDCAGMQSNHAALLVGYGEESGQKYWILKNSWGEGFGEGGYVRVSRGVNLCNIAEEASYPNLQQRQQQRQYGGVKCIAAT
| Type | Start | End | Length |
| CDS |
22332 |
22361 |
30 |
| CDS |
25439 |
25463 |
25 |
| CDS |
27441 |
28375 |
935 |
| CDS |
28434 |
28535 |
102 |
| intron |
22362 |
25438 |
3077 |
| intron |
25464 |
27440 |
1977 |
| intron |
28376 |
28433 |
58 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001959958 |
GF13132 [Drosophila ananassae] gb|EDV36780.1| GF13132 [Drosophila ananassae] |
6e-44 |
| InterPro |
IPR013128 |
Peptidase C1A, papain |
|
| InterPro |
IPR025661 |
Cysteine peptidase, asparagine active site |
|
| InterPro |
IPR000668 |
Peptidase C1A, papain C-terminal |
|
| Gene Ontology(BP) |
GO:0006508 |
proteolysis |
|
| Gene Ontology(MF) |
GO:0008234 |
cysteine-type peptidase activity |
|
| Pfam |
PF03051.10 |
Peptidase C1-like family |
0.013 |
| Pfam |
PF00112.18 |
Papain family cysteine protease |
1.6e-59 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.16316 |