MidgeBase gene description page [Pn.00359]
Outline
| Gene ID | Pn.00359 |
| Type | Protein coding gene |
| Scaffold | PnScaf402 |
| Start | 5633 |
| End | 6528 |
| Direction | + |
Sequence
Transcript: 825 (bp)
ATGAGAATATCTGTTCTTGCACTCGACATTGGAACCGAAGAAATTTCATTGGATTATCGGAAAATTAAGGATATAGCAGAGCCTGAAACCAGAATACTGAAACTGTGCTCACAAGCGATTGCCAGAAATATCATTTTCGCGTCGTGCTCATCAAACTACGCGATCAAAATTTTCTCCGTAAATGAAAATGAAGTTCTATGTCTCAAACAAATTGACGCTCACACCAACTACATCAACTCTATAGACTTTTCGGAAGACTATTTGGCGTCTGGAAGCGATGATCACACATGCCAAATATTTTCGGTTAAGGAAGACAATTTTGAAAACAATTCGGTCCTTCACTTTTCGGCAGCCGTAAGCTGCGTAAAATTCAACCCCGAGGAGCGCAACAAGCTTTTGATCAGCGTCAAGAATGGCAATTTATTTATTTATTGTTTGAAACTAAGGCAGTCTCTGTACAGCTTTTACACCCAATCACCTCTGATGCACTTCGACTGGTCGCTCAAAAATCCGTGCATCGTCGCAGCCATTGCTTACGACCAAGTCTTCTACTTCGACATCATATCCAAGCCAGACGTTCCAATATACAGCAAGAGGCTGAGTGATGTTGGCAAAATTATTGCAATCCACCCGCAAAATCCGTTAATTTCTGCAGTCATATGCAACCGAGCTGCAACAGAGGTCAAAGTCATTCACCAGAAGAGCACCATCTCGAACATTTTTTCAACAAAGATCATCTCCTATGCTGGAAATATCGCCTGGAATTCATCTTATTTAATCGTCGGCTCAGACCGAAAGATGTGCTTCTATAAGATACCAATTTCA
Protein: 275 (aa)
MRISVLALDIGTEEISLDYRKIKDIAEPETRILKLCSQAIARNIIFASCSSNYAIKIFSVNENEVLCLKQIDAHTNYINSIDFSEDYLASGSDDHTCQIFSVKEDNFENNSVLHFSAAVSCVKFNPEERNKLLISVKNGNLFIYCLKLRQSLYSFYTQSPLMHFDWSLKNPCIVAAIAYDQVFYFDIISKPDVPIYSKRLSDVGKIIAIHPQNPLISAVICNRAATEVKVIHQKSTISNIFSTKIISYAGNIAWNSSYLIVGSDRKMCFYKIPIS
| Type | Start | End | Length |
| CDS |
5633 |
6207 |
575 |
| CDS |
6276 |
6525 |
250 |
| intron |
6208 |
6275 |
68 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001660021 |
hypothetical protein AaeL_AAEL009399 [Aedes aegypti] gb|EAT38739.1| conserved hypothetical protein [Aedes aegypti] |
9e-29 |
| InterPro |
IPR017986 |
WD40-repeat-containing domain |
|
| InterPro |
IPR015943 |
WD40/YVTN repeat-like-containing domain |
|
| InterPro |
IPR001680 |
WD40 repeat |
|
| Gene Ontology(MF) |
GO:0005515 |
protein binding |
|
| Pfam |
PF00400.27 |
WD domain, G-beta repeat |
1.1e-13 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| M. musculus |
ENSMUSG00000035351 |
| P. humanus |
PHUM088070-PA |
| A. gambiae |
AGAP011887 |
| H. sapiens |
ENSP00000251074 |
| D. melanogaster |
FBgn0039301 |
| S. invicta |
SI2.2.0_07254 |
| T. castaneum |
TC007691 |
| N. vitripennis |
NV15703-PA |
| A. aegypti |
AAEL009399 |
| H. sapiens |
ENSP00000448054 |
| A. mellifera |
GB10934-PA |
| P. vanderplanki |
Pv.17113 |
| C. quinquefasciatus |
CPIJ015644 |