MidgeBase gene description page [Pn.00321]
Outline
| Gene ID | Pn.00321 |
| Type | Protein coding gene |
| Scaffold | PnScaf383 |
| Start | 8619 |
| End | 10052 |
| Direction | - |
Sequence
Transcript: 909 (bp)
ATGAAATTTCCCAAAATTTTTCTCCTCGCGCTGTCGCTGAACCTCGCCGCTTCGCAAGTGCCGGTGCGCGAGGGCTGGAGGTTGGTGAAATCGCCGCTCGACACACCGCACTATCGCGAAGTCATGGCCGACATCTACGCGAATTTCCCGGCCCCCATAACGAGGCGTGGCGGCCGAATAGCCGGCGGCGAGCTCGCAAAACTCGGCCAATTTCCGCACCTGGTGCTGCTCTACAACGTCGACCGATTCGGCGACACGTACGTGTGTGGCAGCAGCATAATCAGCCACAACTGGCTGCTCACGGCCGGCCACTGTCTCGACGAAATCGTCCGCACAACCGCCTATGCGGGCATCGTCAACCGCGTCCGCGGACCGGCCGTTTGGTCGATGGACATCGCAGCCAGCTCGGGCAACTTCATCTTCCACGAGGACTTCAAGGGCATCACGAACGACATCGCCCTCATCCGACTCGTGAGTTCGATTCCGCACGACCCGAATGTCAACTTTGTGCCGCTGCCGAGTCGGAGCGACGCGAGCGTGCTGCTGGATGGAAAGCTGGCCACCGTGGCCGGCTTTGGGAGGACGAGCGACGTGAACCAGCAGCCGTCGGAATACTTGCGCTTCATGACGCAGACCATCTACCCGAACAGCAAGTGCGAGGCGTCCTATGGAAAGGCCAACGTGAGGGACACGAACCTGTGTCTGAGCGGCAGCAACGGGAGGTCGACGTGCCAGGGCGATTCAGGCGGACCGCTAACGACGGAGATCGCGCCGGGAAGAGAAGTCTTAGTGGGCATTGTGTCGTTCGGCGCTGACGCAGGCTGCACGCTCGGACATCCGCTCGTCTTCACGAGAGTCACCAGCTTCCTCGACTGGATCGAACACAAAACCGGCATCTACATAGCGAAC
Protein: 303 (aa)
MKFPKIFLLALSLNLAASQVPVREGWRLVKSPLDTPHYREVMADIYANFPAPITRRGGRIAGGELAKLGQFPHLVLLYNVDRFGDTYVCGSSIISHNWLLTAGHCLDEIVRTTAYAGIVNRVRGPAVWSMDIAASSGNFIFHEDFKGITNDIALIRLVSSIPHDPNVNFVPLPSRSDASVLLDGKLATVAGFGRTSDVNQQPSEYLRFMTQTIYPNSKCEASYGKANVRDTNLCLSGSNGRSTCQGDSGGPLTTEIAPGREVLVGIVSFGADAGCTLGHPLVFTRVTSFLDWIEHKTGIYIAN
| Type | Start | End | Length |
| CDS |
8622 |
8785 |
164 |
| CDS |
9019 |
9325 |
307 |
| CDS |
9615 |
10052 |
438 |
| intron |
8786 |
9018 |
233 |
| intron |
9326 |
9614 |
289 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001957954 |
GF10666 [Drosophila ananassae] gb|EDV40760.1| GF10666 [Drosophila ananassae] |
1e-41 |
| InterPro |
IPR009003 |
Peptidase cysteine/serine, trypsin-like |
|
| InterPro |
IPR001314 |
Peptidase S1A, chymotrypsin-type |
|
| InterPro |
IPR001254 |
Peptidase S1/S6, chymotrypsin/Hap |
|
| InterPro |
IPR018114 |
Peptidase S1/S6, chymotrypsin/Hap, active site |
|
| Gene Ontology(BP) |
GO:0006508 |
proteolysis |
|
| Gene Ontology(MF) |
GO:0004252 |
serine-type endopeptidase activity |
|
| Gene Ontology(MF) |
GO:0003824 |
catalytic activity |
|
| Pfam |
PF13365.1 |
Trypsin-like peptidase domain |
0.043 |
| Pfam |
PF00089.21 |
Trypsin |
2.1e-43 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. melpomene |
HMEL004610-PA |
| P. vanderplanki |
Pv.04732 |