MidgeBase gene description page [Pn.00304]
Outline
| Gene ID | Pn.00304 |
| Type | Protein coding gene |
| Scaffold | PnScaf352 |
| Start | 139269 |
| End | 140707 |
| Direction | - |
Sequence
Transcript: 1374 (bp)
ATGGCATTTAAGTCAAGTATTATATTGTTCTTAGTGATTTTAATTAGTTCAATCTCTTGCAATACAATCGATCAAGAGTTGGAGAATAAGAATGTCGAAAGAGCGATTGACATAACGACACAATTGGTGAAAATTTCATACAAAATCACATTGGAGCACAAGTCGAAAAAGCCGATCAGCAATTATGTGTTCCAATTACCTATCAACGAGTGCAACAAATTATCGTTCATATCTGCACGCGATTCAGCTAAGAAGGAACTGAAAATGACGAATTCAAAGAACGCAAATGAGTGTTCTTACACGATGACGTTGACTGCGAATGGAAATCCAGTGGTCTTCGTTGAGGCTGTTTTCTCGAAGGCTCTCGAGCCATTCCCAACTGCAATTCCTCAATCTGAGCGACAATTAGTTCGTTATTTCGGCAGTGCATACTTCTATTCGCCCTACAAAACGCTTTCGCAAAAAACCGTCATCCATCTTTCATCAAAGAGCGTTGAGAGTTTCACACAGCTCAAGCCATCATCGCAGACCGATGCCCAAATTGTCTACGGCCCTTACGAAAATATTGATCCAAAATCGAAGCACGAAATTATTGTTCACTATGAGAACAACACGCCCTTTATGACAATCACGAAGTTGGAAAGAACCATCGAGGTGTCTCACTGGGGAAATGTCGCTGTTGAAGAAACGATTGATATTGTTCACTCAGGCGCTTTGCTCAAAGGTTCATTCTCTCGTTATGACTATCAAAAGGACTCTCGTAGCGGACCAGCTAGCGTAAAGTCATACAAAACCATTCTGCCAGCATCAGCAACAGGCGTATACTACCGAGACACCAACGGAAATATTTCTACGTCGGCAATGAGAATTTTAAAGGATTCGGTTGAGTTGGATTTGCGACCACGTTTCCCACTGTTTGGAGGATGGCGTACCCATTACACGGTCGGCTACAATGTCCCAAGCTTCGAGTATCTGTTCTACAGCGGAGACAACTATATGCTTAAAATGCGAGTCATCGATCATGTTTTTGATGATATGATTGTCGATGAGTTGGTCACAAAAATTATTCTCCCAGAGGGAAGTAAGAACATTAAGTTGGTGACGCCATATACTGTGGAGAGAAAGCCCGATTCCTTGCATTTTACCTATTTGGACATCACAGGTCGACCAGTCATTACATTCCGCAAAACAAATCTGGTTGAAAATCACATCAACGATTTCAACGTTAAGTACAATTTCTCTCGCGTCATGATGCTTCAGGAACCACTGCTCGTCATTGTGTTCCTATACCTCATTTTCCTCTTTGTGATTATTTGGACACGACTCGATTTTTCGATCATCAAAGAGCGCGAGCAACAACACTTGCATAAAGAC
Protein: 458 (aa)
MAFKSSIILFLVILISSISCNTIDQELENKNVERAIDITTQLVKISYKITLEHKSKKPISNYVFQLPINECNKLSFISARDSAKKELKMTNSKNANECSYTMTLTANGNPVVFVEAVFSKALEPFPTAIPQSERQLVRYFGSAYFYSPYKTLSQKTVIHLSSKSVESFTQLKPSSQTDAQIVYGPYENIDPKSKHEIIVHYENNTPFMTITKLERTIEVSHWGNVAVEETIDIVHSGALLKGSFSRYDYQKDSRSGPASVKSYKTILPASATGVYYRDTNGNISTSAMRILKDSVELDLRPRFPLFGGWRTHYTVGYNVPSFEYLFYSGDNYMLKMRVIDHVFDDMIVDELVTKIILPEGSKNIKLVTPYTVERKPDSLHFTYLDITGRPVITFRKTNLVENHINDFNVKYNFSRVMMLQEPLLVIVFLYLIFLFVIIWTRLDFSIIKEREQQHLHKD
| Type | Start | End | Length |
| CDS |
139272 |
140074 |
803 |
| CDS |
140137 |
140707 |
571 |
| intron |
140075 |
140136 |
62 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
ABF18438 |
olygosaccharyltransferase alpha subunit [Aedes aegypti] |
0.0 |
| InterPro |
IPR007676 |
Ribophorin I |
|
| Gene Ontology(BP) |
GO:0006486 |
protein glycosylation |
|
| Gene Ontology(CC) |
GO:0005783 |
endoplasmic reticulum |
|
| Gene Ontology(CC) |
GO:0016021 |
integral to membrane |
|
| Gene Ontology(MF) |
GO:0004579 |
dolichyl-diphosphooligosaccharide-protein glycotransferase activity |
|
| Pfam |
PF04597.9 |
Ribophorin I |
8e-136 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. sapiens |
ENSP00000417529 |
| H. sapiens |
ENSP00000296255 |
| A. gambiae |
AGAP010174 |
| A. mellifera |
GB14947-PA |
| T. castaneum |
TC005188 |
| A. aegypti |
AAEL013071 |
| P. vanderplanki |
Pv.08328 |
| D. melanogaster |
FBgn0053303 |
| S. invicta |
SI2.2.0_11990 |
| P. humanus |
PHUM215320-PA |
| M. musculus |
ENSMUSG00000030062 |
| B. mori |
BGIBMGA002570-TA |
| H. melpomene |
HMEL009062-PA |
| C. quinquefasciatus |
CPIJ003124 |
| D. plexippus |
DPOGS201416PA |
| N. vitripennis |
NV15365-PA |