MidgeBase gene description page [Pn.00282]

Outline

Link to gbrowse

Gene ID Pn.00282
Type Protein coding gene
Scaffold PnScaf352
Start 9996
End 11770
Direction +

Sequence

Transcript: 1608 (bp)

 ATGTCTGAGAGTTCAGCAGCACCTCTGATAAAAATCGGTCATTACACACTCGGACGCACGCTTGGAAATGGCACGTTTGGAAAAGTTAAAATCGGAGAGCACGTCGTTACGAAGCATAAAGTGGCTATTAAGATTTTGAATCGTCAAAAGATCAAGTCGCTGGATGTTGTTGGAAAAATTCGTAGAGAAATTCAAAATTTGAAGCTCTTTCGCCATCCACACATTATTAAACTCTATCAAGTGATATCGACACCAACCGATATCTTCATGATAATGGAATATGTCAGCGGTGGTGAATTGTTCGATTATATTGTGAAACAAGGACGACTGCAAGAGTCTGAATCGCGAAAGTTTTTCCAACAAATCATCTCAGGCGTTGATTATTGTCATCGTCATATGATTGTTCATCGTGATTTAAAGCCGGAAAACTTGCTGCTGGATCACAATATGCACGTAAAGATTGCCGATTTCGGTCTATCAAACATGATGCTAGATGGTGAATTTTTACGTACAAGCTGTGGCAGTCCAAATTATGCAGCTCCAGAAGTCATTTCTGGAAAGTTATATGCAGGACCTGAAGTCGATATTTGGAGTTGTGGTGTAATTCTGTATGCCTTGCTGTGCGGAACATTGCCTTTCGATGACGAGCATGTTCCCACTCTTTTCCGCAAGATCAAATCAGGAATTTTTCCGATTCCGGAGTATTTGAACAAACAAGTCGTGTCGCTTTTATGTCAAATGTTGCAAGTCGATCCGCTCAAGAGAGCAACAGTCGAAGAAATCAAGAAACACGAGTGGTTCCAAAAGGACTTGCCCGCGTATCTCTTTCCATCGCCAGTCGAACAAGATTCGTCAGTAATCGACACCGGAGCAGTTTCGGAAGTTTGCGAGAAATTTGGTGTGAAAGAAGTTGAGGTCCATAATGCATTACTTTCTGGTGATCCACACGATCAATTAGCCATCGCTTATCACTTTATCGACAACAGACGCATGGATGAGGCTGCTAAAGCTGAAATCAAAGATTTCTATGTCGCTTCTTCGCCACCGCCGCAAATCATCGCGCAACCAGTTCACCAGCCGTCGACCGATAACAATCCGTCGAAACCACATCCCGAACGAATTGCTCCACTCCGTGAAAAAGCCGTTACAACACATGCATTAAGCTACACCGAAGGAGCTACTGTTGCTGCCGATCGCCTAATTACGCAGGACAAATATCGCGGCACTCCAGTTAAACGTGCAAAATGGCATTTGGGCATTCGCTCGCAGAGCAAGCCTAACGATATCATGCTAGAAGTTTATCGTGCAATGAAAGCTTTAGACTACGAATGGAAAGTCATCAATCCTTATCACGTTCGCGTCCGAAAGAAGAACAAGGATGATCGCTACGTTAAAATGTCGTTGCAGCTTTACCAAGTCGATCCCAAATCGTATCTCGTTGACTTCAAGAGCCTCACTAATGAAGAAGTAGAGCAGAGTGACGATATGATTAGCTTGACTCCACCGGTCGCTAATCAAACTCCGATTCAGACAAATACACAAATTTCGGGACACCATACAATGGAATTCTTTGAAATGTGTGCGTCATTGATAATTCAATTGGCTCGA 

Protein: 536 (aa)

 MSESSAAPLIKIGHYTLGRTLGNGTFGKVKIGEHVVTKHKVAIKILNRQKIKSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPTDIFMIMEYVSGGELFDYIVKQGRLQESESRKFFQQIISGVDYCHRHMIVHRDLKPENLLLDHNMHVKIADFGLSNMMLDGEFLRTSCGSPNYAAPEVISGKLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFRKIKSGIFPIPEYLNKQVVSLLCQMLQVDPLKRATVEEIKKHEWFQKDLPAYLFPSPVEQDSSVIDTGAVSEVCEKFGVKEVEVHNALLSGDPHDQLAIAYHFIDNRRMDEAAKAEIKDFYVASSPPPQIIAQPVHQPSTDNNPSKPHPERIAPLREKAVTTHALSYTEGATVAADRLITQDKYRGTPVKRAKWHLGIRSQSKPNDIMLEVYRAMKALDYEWKVINPYHVRVRKKNKDDRYVKMSLQLYQVDPKSYLVDFKSLTNEEVEQSDDMISLTPPVANQTPIQTNTQISGHHTMEFFEMCASLIIQLAR 
Type Start End Length
CDS 9996 10062 67
CDS 10164 10602 439
CDS 10666 11767 1102
intron 10063 10163 101
intron 10603 10665 63

Auto annotation result

Program/Analysis Accession Description Score/Expectation
BLASTP/NCBI-nr XP_312237 AGAP002686-PA [Anopheles gambiae str. PEST] gb|EAA07706.4| AGAP002686-PA [Anopheles gambiae str. PEST] 0.0
InterPro IPR017441 Protein kinase, ATP binding site
InterPro IPR000719 Protein kinase, catalytic domain
InterPro IPR002290 Serine/threonine- / dual-specificity protein kinase, catalytic domain
InterPro IPR020635 Tyrosine-protein kinase, catalytic domain
InterPro IPR011009 Protein kinase-like domain
InterPro IPR008271 Serine/threonine-protein kinase, active site
Gene Ontology(BP) GO:0006468 protein phosphorylation
Gene Ontology(MF) GO:0004713 protein tyrosine kinase activity
Gene Ontology(MF) GO:0004674 protein serine/threonine kinase activity
Gene Ontology(MF) GO:0005524 ATP binding
Gene Ontology(MF) GO:0004672 protein kinase activity
Gene Ontology(MF) GO:0016772 transferase activity, transferring phosphorus-containing groups
Pfam PF00069.20 Protein kinase domain 9.4e-79
Pfam PF06293.9 Lipopolysaccharide kinase (Kdo/WaaP) family 0.022
Pfam PF01636.18 Phosphotransferase enzyme family 0.072
Pfam PF07714.12 Protein tyrosine kinase 3.6e-45

Expression level (RPKM)

Paralog/Ortholog genes

Paralogous genes

Gene ID

Orthologous genes

Species Gene ID
D. melanogaster FBgn0023169
H. sapiens ENSP00000360290
A. aegypti AAEL007153
H. sapiens ENSP00000380317
S. invicta SI2.2.0_10963
B. mori BGIBMGA013139-TA
M. musculus ENSMUSG00000050697
C. quinquefasciatus CPIJ002898
A. gambiae AGAP002686
P. humanus PHUM029040-PA
M. musculus ENSMUSG00000028518
P. vanderplanki Pv.09339
A. mellifera GB15108-PA
D. plexippus DPOGS212769PA
T. castaneum TC008646
H. melpomene HMEL008325-PA
N. vitripennis NV13517-PA
H. sapiens ENSP00000346148