MidgeBase gene description page [Pn.00192]
Outline
| Gene ID | Pn.00192 |
| Type | Protein coding gene |
| Scaffold | PnScaf285 |
| Start | 14072 |
| End | 16805 |
| Direction | + |
Sequence
Transcript: 2205 (bp)
ATGGCGAGAATTTTCAGCGTAATATTTCTCGTCATAATACCTTTATTTGAAGCTCAAACTCAACTACACAAAAATTTAAAGTACTATGAAACGCTACACGTAAATGAAATAAGCCATAAAGTAGTTAAGAGAGGCATCAAGCCGAGCTTGAATCTGCACAACAAGATCCGGGAAGTTGAGTTCACAGCCCTCGGAAAGAAATTCAAGCTCATTCTCCATCCACACAGGGATGTTCTGCATCAGAATTTTCGTGCGTACAATGTCGACTCGGAGGGCAACGAAACGATAATTCATCTCGATCATGACAGCTTCTTCCGCGGCCGTGTGTTTGGTGAATCGATTTCTCACGTCTCCGCACATATCGACGATTCAAACGTCCTCACAGCCACCATCATTCTCCCCGATGAGACTTACCACATCGGCGACAAGCACATGGTCGCATACAAGGCTTCCGACGTGCAGCTGAGTTGGGAAAATCAGAAGGAAAAAGACGGCCACGACCACCATTTTACGCCTGGTCGCTGTGGGTACGTCAAAGAAGGCGCAGAGCTCGAGATGGATGATGAAGAGGAGTTTGAGGAGCCAGAAGTCGAAGCGTACGGCGGAAATGAGCTAACACATCACGATGAAAGGAAGAAAAGAACGAGGAGGCAAGCAGATCAGTACGAATATACGCCAACAAAGACTCGCTGTCCCCTCCTGCTTGTCGCTGACTATCGCTTCTTCCAAGAAATGGGAAGTTCCAACACGAAAACCACTATATCTTATCTGATAAGCTTGATCGATCGCGTTCACAAGATCTATAACGACACAATTTGGCAGGACCGAGATGCAGACGGCTTTCGAGGCATGGGATTCGTCATCAAGAAGATTCTCGTTCACAGCGAGCCAACCAAGGTTCGAGGCGGAGAGGCGCACTACAACATGATTCGAGAAAAGTGGGATGTCAGAAATTTGCTCGAGGTCTTTTCTCGTGAATATTCTCACAAAGATTTCTGTCTTGCACATCTTTTTACCGATTTAAAATTTGAAGGCGGCATTTTAGGGCTTGCTTATGTCGGATCGCCACGAAGAAATTCCGTTGGAGGCATTTGCACCCCTGAATACTTCAAGAATGGCTACACACTTTATTTGAATTCCGGCCTGAGTTCTTCGAGAAACCATTACGGTCAGCGAGTTATCACGAGGGAGGCCGACTTGGTTACTGCGCACGAGTTTGGTCACAACTGGGGAAGTGAACACGACCCCGACATTCAAGAGTGCTCGCCCAGCGCATCGCAGGGAGGCAGCTTTCTGATGTACACGTATTCGGTCAGTGGCTACGATGTCAACAACAAAAAGTTCTCGCCATGCTCCTTGAGATCAATCAGAAAAGTCTTGCAGGCGAAGAGTGGCCGCTGCTTCAGCGAACCGGAGGAGTCATTTTGCGGAAACTTGCGAGTTGAGGGAGATGAGCAGTGCGATGCGGGACTCTTGGGGACGGAGGACAATGACCAGTGCTGTGACAAGAATTGCAAATTGCGGAAGAACCAAGGAGCCGTGTGCAGCGACAAAAATTCACCGTGCTGTCAAAATTGCCAGTTCATGCCTGCAGGAGTCAAGTGTCGCGAAGCAGCCTACAGTACGTGCGAGCAAGAGGCTCGATGCACAGGAAACAGCGCTGACTGCCCCAAGTCGCCGGCGATGAGCGACGGAACAATTTGTCAAGAGCGCGGTCAATGCAGAAGCGGAAAATGCGTGCCGTATTGTGAGACGCAGGGTCTTCAGAGCTGTATGTGCGATGTCATAGCGGATGCATGCAAGAGATGTTGTCGCATGTCCATCAATGAGACGTGCTTTGCCGTCGAGCCTCCAGACATTCTTCCCGATGGAACGCCATGCATTCAGGGCTTCTGCAACAAAGGCGTCTGCGAGAAGACAATTCAGGATGTTGTCGAGAGATTCTGGGACATTATTGAGGAAATCAACATCAACAAGGTGTTGAGGTTTTTGCGCGACAACATTGTCATTGTTGTAATCACAATTACCACTCTGTTTTGGGTGCCGACAAGTTGTCTAATCAGTTACTTCGATAGACGATCGAGACATGCGGAGCTCAAAGAATACAACTGGAAGCAACAGCTCGATTTGATTCATCCGAGCGATCGACGTCGGGTTATTCACATTAGAGTTCCGAGACAGAAGATAACAGTCCCGACCAGAATG
Protein: 735 (aa)
MARIFSVIFLVIIPLFEAQTQLHKNLKYYETLHVNEISHKVVKRGIKPSLNLHNKIREVEFTALGKKFKLILHPHRDVLHQNFRAYNVDSEGNETIIHLDHDSFFRGRVFGESISHVSAHIDDSNVLTATIILPDETYHIGDKHMVAYKASDVQLSWENQKEKDGHDHHFTPGRCGYVKEGAELEMDDEEEFEEPEVEAYGGNELTHHDERKKRTRRQADQYEYTPTKTRCPLLLVADYRFFQEMGSSNTKTTISYLISLIDRVHKIYNDTIWQDRDADGFRGMGFVIKKILVHSEPTKVRGGEAHYNMIREKWDVRNLLEVFSREYSHKDFCLAHLFTDLKFEGGILGLAYVGSPRRNSVGGICTPEYFKNGYTLYLNSGLSSSRNHYGQRVITREADLVTAHEFGHNWGSEHDPDIQECSPSASQGGSFLMYTYSVSGYDVNNKKFSPCSLRSIRKVLQAKSGRCFSEPEESFCGNLRVEGDEQCDAGLLGTEDNDQCCDKNCKLRKNQGAVCSDKNSPCCQNCQFMPAGVKCREAAYSTCEQEARCTGNSADCPKSPAMSDGTICQERGQCRSGKCVPYCETQGLQSCMCDVIADACKRCCRMSINETCFAVEPPDILPDGTPCIQGFCNKGVCEKTIQDVVERFWDIIEEININKVLRFLRDNIVIVVITITTLFWVPTSCLISYFDRRSRHAELKEYNWKQQLDLIHPSDRRRVIHIRVPRQKITVPTRM
| Type | Start | End | Length |
| CDS |
14072 |
14129 |
58 |
| CDS |
14251 |
14963 |
713 |
| CDS |
15030 |
15221 |
192 |
| CDS |
15322 |
15460 |
139 |
| CDS |
15569 |
16060 |
492 |
| CDS |
16119 |
16532 |
414 |
| CDS |
16606 |
16802 |
197 |
| intron |
14130 |
14250 |
121 |
| intron |
14964 |
15029 |
66 |
| intron |
15222 |
15321 |
100 |
| intron |
15461 |
15568 |
108 |
| intron |
16061 |
16118 |
58 |
| intron |
16533 |
16605 |
73 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_312572 |
AGAP002381-PA [Anopheles gambiae str. PEST] gb|EAA08066.5| AGAP002381-PA [Anopheles gambiae str. PEST] |
0.0 |
| InterPro |
IPR024079 |
Metallopeptidase, catalytic domain |
|
| InterPro |
IPR002870 |
Peptidase M12B, propeptide |
|
| InterPro |
IPR001762 |
Blood coagulation inhibitor, Disintegrin |
|
| InterPro |
IPR001590 |
Peptidase M12B, ADAM/reprolysin |
|
| Gene Ontology(BP) |
GO:0006508 |
proteolysis |
|
| Gene Ontology(MF) |
GO:0004222 |
metalloendopeptidase activity |
|
| Gene Ontology(MF) |
GO:0008270 |
zinc ion binding |
|
| Pfam |
PF00413.19 |
Matrixin |
4.2e-05 |
| Pfam |
PF03611.9 |
PTS system sugar-specific permease component |
0.0036 |
| Pfam |
PF13583.1 |
Metallo-peptidase family M12B Reprolysin-like |
2.5e-26 |
| Pfam |
PF13574.1 |
Metallo-peptidase family M12B Reprolysin-like |
4.4e-33 |
| Pfam |
PF13688.1 |
Metallo-peptidase family M84 |
3.6e-36 |
| Pfam |
PF13582.1 |
Metallo-peptidase family M12B Reprolysin-like |
1.1e-10 |
| Pfam |
PF10462.4 |
Peptidase M66 |
0.061 |
| Pfam |
PF00200.18 |
Disintegrin |
2.3e-14 |
| Pfam |
PF01562.14 |
Reprolysin family propeptide |
1e-11 |
| Pfam |
PF01421.14 |
Reprolysin (M12B) family zinc metalloprotease |
9.6e-08 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| D. plexippus |
DPOGS202512PA |
| A. aegypti |
AAEL003910 |
| H. sapiens |
ENSP00000309968 |
| T. castaneum |
TC001039 |
| H. melpomene |
HMEL007445-PA |
| N. vitripennis |
NV14306-PA |
| B. mori |
BGIBMGA001428-TA |
| C. quinquefasciatus |
CPIJ005931 |
| P. humanus |
PHUM024730-PA |
| S. invicta |
SI2.2.0_11269 |
| H. sapiens |
ENSP00000418728 |
| M. musculus |
ENSMUSG00000052593 |
| A. gambiae |
AGAP002381 |
| A. mellifera |
GB18818-PA |
| P. vanderplanki |
Pv.13579 |
| D. melanogaster |
FBgn0039734 |