MidgeBase gene description page [Pn.00165]
Outline
| Gene ID | Pn.00165 |
| Type | Protein coding gene |
| Scaffold | PnScaf267 |
| Start | 12674 |
| End | 16677 |
| Direction | - |
Sequence
Transcript: 1083 (bp)
ATGGAAATGAAAATTGGCTTTCGCACCGCCAGCAGCAGCATTTTATTGCAATTAAATTGCGCAGAAATTTGCAAAGCTTTTAAGCTCGTCGATCAGCAGATCAAACAGTCGACTGATAAGAGCCTCATCTATGCCGTTGCCTGTTATCTTATCGAAAGTCAGCAGTTTAGTGCAGAGAGTCGACGAGGCAGCATCACGATGGACGAGCAGAGAGTGAGTGTGTGGAAAGTCGTGGCCGACGTGATTCTCTTCGGAATCCCCGCTTTGATCGCGCTTCTCCTGAACTTGTTTGTGACGCCATTCCAGAGGAATTTCTTTTGTGCCGATGAGTCAATCATGTACCCGTTCCGCGAGGACACCATCACGACGTTGGCGCTCGCGCTCGGCGGTATCGCAGTGAGCGTCATTTTTTCGCCCAACTGCCCCAATAACGACCTTCTTTATGTTTTTAAGGTATTTGTCGTGGAATTAGTGCATCGCTTCAGCAACTCCTACGAGTACAACGAGGACGAGGATAAGGAGAGCAAACAGCTGCACAACTGGAGCGTCTCGCCCTTCGTGCAGAATCTCTACCAGTACATCGGCCTCCTGCTCTTCGGCATGTCCCTCAACCAGTTCCTGACAGATGCCACCAAGTTTGCCGTCGGCCGCCTGCGTCCGCACTTTATGGACGTGTGCCGACCGGTGCTGCCGGACGGATCGACGTGCAGCGACCAAGCCAACTGGCACCAGTACATTTCGGAGTACACATGCTCGAACCCGGACGTCACCGAGCGGATGCTGACAAACATGCGGCTGTCGTTTCCGTCGGGCCACTCGAGCTTCGCCGTCTACTGCGGATTTTTCTGTGTGTTCTACATCCAATCGAGAATGAAATTCAGAGGGTCGAAAGTGCTTAAGCACTTCATTCAATTAGCCTTCATTACGGCCGCTCTGTACACGGGACTGTCGCGTATCACCGACTACAAGCATCACCCGACAGACGTTATTGCTGGTGCGCTCTTAGGGTTCGCGATTGCCTACGTCGTCTGCTTCTACATGTCGGATCTCTTTAAGCGACGCTTTGTGAGGGTGCTGCCGCGG
Protein: 361 (aa)
MEMKIGFRTASSSILLQLNCAEICKAFKLVDQQIKQSTDKSLIYAVACYLIESQQFSAESRRGSITMDEQRVSVWKVVADVILFGIPALIALLLNLFVTPFQRNFFCADESIMYPFREDTITTLALALGGIAVSVIFSPNCPNNDLLYVFKVFVVELVHRFSNSYEYNEDEDKESKQLHNWSVSPFVQNLYQYIGLLLFGMSLNQFLTDATKFAVGRLRPHFMDVCRPVLPDGSTCSDQANWHQYISEYTCSNPDVTERMLTNMRLSFPSGHSSFAVYCGFFCVFYIQSRMKFRGSKVLKHFIQLAFITAALYTGLSRITDYKHHPTDVIAGALLGFAIAYVVCFYMSDLFKRRFVRVLPR
| Type | Start | End | Length |
| CDS |
12677 |
12907 |
231 |
| CDS |
12983 |
13162 |
180 |
| CDS |
13221 |
13481 |
261 |
| CDS |
13981 |
14132 |
152 |
| CDS |
14195 |
14288 |
94 |
| CDS |
14403 |
14544 |
142 |
| CDS |
16655 |
16677 |
23 |
| intron |
12908 |
12982 |
75 |
| intron |
13163 |
13220 |
58 |
| intron |
13482 |
13980 |
499 |
| intron |
14133 |
14194 |
62 |
| intron |
14289 |
14402 |
114 |
| intron |
14545 |
16654 |
2110 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001841804 |
phosphatidate phosphatase [Culex quinquefasciatus] gb|EDS25757.1| phosphatidate phosphatase [Culex quinquefasciatus] |
2e-63 |
| InterPro |
IPR016118 |
Phosphatidic acid phosphatase/chloroperoxidase, N-terminal |
|
| InterPro |
IPR000326 |
Phosphatidic acid phosphatase type 2/haloperoxidase |
|
| Gene Ontology(CC) |
GO:0016020 |
membrane |
|
| Gene Ontology(MF) |
GO:0003824 |
catalytic activity |
|
| Pfam |
PF14378.1 |
PAP2 superfamily |
0.011 |
| Pfam |
PF04172.11 |
LrgB-like family |
0.14 |
| Pfam |
PF02674.11 |
Colicin V production protein |
0.18 |
| Pfam |
PF01569.16 |
PAP2 superfamily |
1.1e-24 |
| Pfam |
PF02687.16 |
FtsX-like permease family |
0.59 |
| Pfam |
PF14360.1 |
PAP2 superfamily C-terminal |
0.0041 |
| Pfam |
PF09858.4 |
Predicted membrane protein (DUF2085) |
0.097 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| P. vanderplanki |
Pv.03428 |