MidgeBase gene description page [Pn.00162]
Outline
| Gene ID | Pn.00162 |
| Type | Protein coding gene |
| Scaffold | PnScaf257 |
| Start | 89760 |
| End | 91971 |
| Direction | - |
Sequence
Transcript: 1623 (bp)
ATGCACTTTCGATTTTTCCTGATATTTAAAACGAAAAATTTCTCTTTCTTGCTCTTTACCAAAATAAATGAAAACGAAACAGTTGAAAACGAGACGAGATGCTATGGTGAAATTGGATGTCTAAATATTACGAGAGAATGGTATCATTTAATTCATCGACCTTTTAACGTTTTTCCACTGCCGCGAAATGTCATCAATACGAGATTTATCCTTTATACGGAGGAAAATTCAAATGACGGACAACTGCTGGTTGCTGAAGATAAAGATACAATCGTCAACTCGAATTTTCGACCGGATCGCTCGACAAAATTCATTATTCACGGCTTTATCGATACACCGTTATCGACGTGGGTCTCGGAAATGAAAACTGAACTCTTGAAATATTCGAGCCAAAATCAAGTTGTTGTCGTCGATTGGGGTTCTGGCTCGTTGCCTCTATACACGCAAGCAGTGGCAAACACAAGACTGGTAGGATTAGAATTAGCATACTTAATTAAGAAATTACGTGATGAACATGGATTGAATCCTGAGGACGTGCATTTAATTGGCCACTCACTGGGCTCTCATTTAGCTGCTTATGCCGCCGAACGAGTGCCAGGAATCGGGCGAATTACAGGATTAGATCCAGCTGAGCCATTTTTCCAAGGCATGCCGGAGTTCGTTCGACTGGACCCAAGTGATGCAAAATTTGTTGATGTGATTCATACAGATGCACGAAGCCTTTTTCTGCTCGAAATTCCTGGCTATGGAATGAGCCAGACGTGCGGTCATCTGGACTTCTATCCAAACAACGGCAAAGAACAGCCGGGTTGTATTTTGTCACAAGAAAGTAGTGCATTGATTCCCTTGACCCTCATTAAAGACGGTATCGAAGAGGCTTCACGAGTACTTCTTGCGTGCAATCATGTCAGAGCAATCAAGCTCTTCACGGACTCCATTAATGGAAAATGCCAATACGTTGCTCATCGATGTCCATCGTACCAGCATTTCACCGATGGAAAGTGCTTTAAGTGTAATTCAGGAAACTGTGCCTTGATGGGTTATCATGCTCAGATGCCCTATTCTTATTCGCAATACAACGCGTCTGAGAATGATGTCGTTCCCAATGACAACTATCCGCCAGTTGCTCCCGTTCAGGGAAAATACTTCTTAACAACGGGAAAAGACCCATACTGTCAGCGCCATTATCGCTTCATTATTGAGCTCGCGAAGCCAGTAATGGCTGAGAAGTGGGTACAAGGTTTTCTCAGCGCTGGAGTGTTTACCGAGCGTGGTAAAAGCTTGAGAAATTTAGACTTAACACCGAAAGGCACACAGCGTTTCGAGCACGGCAAGTCATACATGATCGTCATAACTAACCCAAACGATATCGGTGATAAAGTTAATAAAGTCGAGTTGAATTGGAGTCATGAAATGAACGTTCTTGAGCCGCGAAACCTCTGCTTGTTTTGGTGCAATGACCATCTTTACGTGAAGTCAGTGACCGTAGACATGATGCAAATGCCAACTCGAGAAAAACGTGAGTTGGAGAAATCGAACAAACTCTGCCCAAAGCAGCAGGAATATGCCGATATCAAATCTCTTGGACGAGTTCTCTTTTATGATAAATGTAAGCAACAGCTG
Protein: 541 (aa)
MHFRFFLIFKTKNFSFLLFTKINENETVENETRCYGEIGCLNITREWYHLIHRPFNVFPLPRNVINTRFILYTEENSNDGQLLVAEDKDTIVNSNFRPDRSTKFIIHGFIDTPLSTWVSEMKTELLKYSSQNQVVVVDWGSGSLPLYTQAVANTRLVGLELAYLIKKLRDEHGLNPEDVHLIGHSLGSHLAAYAAERVPGIGRITGLDPAEPFFQGMPEFVRLDPSDAKFVDVIHTDARSLFLLEIPGYGMSQTCGHLDFYPNNGKEQPGCILSQESSALIPLTLIKDGIEEASRVLLACNHVRAIKLFTDSINGKCQYVAHRCPSYQHFTDGKCFKCNSGNCALMGYHAQMPYSYSQYNASENDVVPNDNYPPVAPVQGKYFLTTGKDPYCQRHYRFIIELAKPVMAEKWVQGFLSAGVFTERGKSLRNLDLTPKGTQRFEHGKSYMIVITNPNDIGDKVNKVELNWSHEMNVLEPRNLCLFWCNDHLYVKSVTVDMMQMPTREKRELEKSNKLCPKQQEYADIKSLGRVLFYDKCKQQL
| Type | Start | End | Length |
| CDS |
89763 |
89871 |
109 |
| CDS |
89965 |
90510 |
546 |
| CDS |
90578 |
90858 |
281 |
| CDS |
90956 |
91025 |
70 |
| CDS |
91121 |
91154 |
34 |
| CDS |
91238 |
91273 |
36 |
| CDS |
91331 |
91477 |
147 |
| CDS |
91572 |
91971 |
400 |
| intron |
89872 |
89964 |
93 |
| intron |
90511 |
90577 |
67 |
| intron |
90859 |
90955 |
97 |
| intron |
91026 |
91120 |
95 |
| intron |
91155 |
91237 |
83 |
| intron |
91274 |
91330 |
57 |
| intron |
91478 |
91571 |
94 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_308198 |
AGAP007672-PA [Anopheles gambiae str. PEST] gb|EAA04199.5| AGAP007672-PA [Anopheles gambiae str. PEST] |
0.0 |
| InterPro |
IPR002331 |
Pancreatic lipase |
|
| InterPro |
IPR000734 |
Lipase |
|
| InterPro |
IPR013818 |
Lipase, N-terminal |
|
| InterPro |
IPR016272 |
Lipoprotein lipase, LIPH |
|
| Gene Ontology(BP) |
GO:0006629 |
lipid metabolic process |
|
| Gene Ontology(MF) |
GO:0004806 |
triglyceride lipase activity |
|
| Gene Ontology(MF) |
GO:0003824 |
catalytic activity |
|
| Pfam |
PF00561.15 |
alpha/beta hydrolase fold |
1.8e-06 |
| Pfam |
PF07819.8 |
PGAP1-like protein |
0.04 |
| Pfam |
PF05990.7 |
Alpha/beta hydrolase of unknown function (DUF900) |
0.003 |
| Pfam |
PF06415.8 |
BPG-independent PGAM N-terminus (iPGM_N) |
0.064 |
| Pfam |
PF01764.20 |
Lipase (class 3) |
0.11 |
| Pfam |
PF12695.2 |
Alpha/beta hydrolase family |
0.00017 |
| Pfam |
PF12697.2 |
Alpha/beta hydrolase family |
4.3e-06 |
| Pfam |
PF00151.14 |
Lipase |
8.3e-93 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. sapiens |
ENSP00000446346 |
| P. vanderplanki |
Pv.05027 |
| A. mellifera |
GB11855-PA |
| H. sapiens |
ENSP00000358223 |
| H. sapiens |
ENSP00000461234 |
| H. sapiens |
ENSP00000468117 |
| A. gambiae |
AGAP007672 |
| H. sapiens |
ENSP00000463502 |
| B. mori |
BGIBMGA000301-TA |
| H. sapiens |
ENSP00000434159 |
| H. sapiens |
ENSP00000351695 |
| P. humanus |
PHUM194110-PA |
| C. quinquefasciatus |
CPIJ000186 |
| D. plexippus |
DPOGS200928PA |
| H. sapiens |
ENSP00000458759 |
| M. musculus |
ENSMUSG00000046008 |
| H. sapiens |
ENSP00000433933 |
| S. invicta |
SI2.2.0_14644 |
| H. melpomene |
HMEL011322-PA |
| T. castaneum |
TC001672 |
| A. aegypti |
AAEL012654 |
| H. sapiens |
ENSP00000459617 |
| M. musculus |
ENSMUSG00000042179 |
| M. musculus |
ENSMUSG00000025091 |
| N. vitripennis |
NV17120-PA |