MidgeBase gene description page [Pn.00132]
Outline
| Gene ID | Pn.00132 |
| Type | Protein coding gene |
| Scaffold | PnScaf239 |
| Start | 267 |
| End | 2382 |
| Direction | - |
Sequence
Transcript: 1563 (bp)
ATGACAAAGTGGTTTCTTGTGTTTACGCTCTTCGCACTCATCTTCTCGGGCGATGGGCGAACATCGAAAAATCTCCGAGTGCAGCTGCCAGACGGCAGCAAAATTGTCGGCAGGTACTTGACTTCGGACAGCGGCCGCGGCATTAGAAGTTTCCTGGGAGTTCCGTACGCTGAACCGCCGATCGGCGACTTGCGGTTTAAGGCCCCGCAAAAGAAGCAGCCATGGACGGACGAGCTCAAAGCTCACTTCGATCCGCCGATCTGCATTCAGCGCGATCCCTTCCGGCGAGATTACGAGATCAGCGGCAGCGACGACTGCCTCTACATCAACATCTACACGCCGGAGCGCATCGAGCAGCCTCTGCCGGTGATGGTCTTCTTCCACGGCGGCGGTTTTATGTGCGGCTCGGGCATCAAGCCCTTCTACGGCCCCGACTACCTCCTCGAGTACGACGTCGTCTACATCGGCGCGAACTACCGCGTCGGCCCGCTCGGCTTCCTCTCGACTGGCGACGACAGCAGCCCGGGTAACTTCGGCCTCAAGGACCAGAGCGCCGTCCTCCGCTGGATCAGCGAAAACATCGAGGCTTTCGGCGGCGACAAGGATCGCGTGACGATTTTCGGCGAGAGCGCGGGCGGCGCCAGTGTCACATACCACATGCAGTCGCAACTGTCGCGCGGCCTCTTCCACCGCGGCATCGCTCAGTCGGGCACGAATTTGGCGCCGTGGGGAGCTGTCGCGCACGCGGGCGTCGCTCAGCAGCGCGCGAAAAAGATGGGCGAAATGATGGGCTGCCCCACGCACGAAAACGCCGCCATGATCGAGTGTCTGAGGCAGGTGCCGGCACACAACATCACTGCCGCCTTCTACGATTTCTTCACGTGGGACACGGATCCGATGGTGCCGTTCCCGCCGGTCGTGGAGCACAAGCACGAGGGCGCCTTCATCAGCGAAAACCCACGATTCGTGAGCGACATGCACGGCAATGAGATTCCGCTGATGACGGGCGTGACGAGCGAGGAGGGCGTGCTGAAGACGGGCGCGCTGATTTTCAACGACAATCTCCGAAGCGACTTGCTCGCGAACTGGCACGAGGCGCTCTCGACGTCGCTCTACTACGACCACCATGGGCGCGAGCGGCAGGCGGAAATCACGCGCGAAATCGACGCGTTTTACTTCGGAAATCGGAAACTCACGCCCGAGACGGAGCGGAATTTCACGGACTTGTGGACGGACGGCTGGTTTTTCCACGCGATGGTCGACTACTTGAAGCTGAGGTTTTCGAGTGAGCGGCGTGCCGCCACCTACGTCTACCTTTTTACTCACAAGGGCGCCGCGAGCTTCAGCGAGATTTTCAAGGCGGGATCCGAGACTTACTATGGAACGGCGCACGCTGAGGAGCTGCAGTATTTGTTCCCGATTCGCAAGGACTTGCCCTACTTTTTCAACTCGGTTCCGAGCGAGCAGGACAAGCGAATTAGCGGGATTTTAACGAAGCTTTGGGTGAATTTCGCCTACACCGGCGCGCGCGGTTATCAGTTTCATGCCTCTGACCGCTACGGT
Protein: 521 (aa)
MTKWFLVFTLFALIFSGDGRTSKNLRVQLPDGSKIVGRYLTSDSGRGIRSFLGVPYAEPPIGDLRFKAPQKKQPWTDELKAHFDPPICIQRDPFRRDYEISGSDDCLYINIYTPERIEQPLPVMVFFHGGGFMCGSGIKPFYGPDYLLEYDVVYIGANYRVGPLGFLSTGDDSSPGNFGLKDQSAVLRWISENIEAFGGDKDRVTIFGESAGGASVTYHMQSQLSRGLFHRGIAQSGTNLAPWGAVAHAGVAQQRAKKMGEMMGCPTHENAAMIECLRQVPAHNITAAFYDFFTWDTDPMVPFPPVVEHKHEGAFISENPRFVSDMHGNEIPLMTGVTSEEGVLKTGALIFNDNLRSDLLANWHEALSTSLYYDHHGRERQAEITREIDAFYFGNRKLTPETERNFTDLWTDGWFFHAMVDYLKLRFSSERRAATYVYLFTHKGAASFSEIFKAGSETYYGTAHAEELQYLFPIRKDLPYFFNSVPSEQDKRISGILTKLWVNFAYTGARGYQFHASDRYG
| Type | Start | End | Length |
| CDS |
270 |
309 |
40 |
| CDS |
371 |
1692 |
1322 |
| CDS |
2182 |
2382 |
201 |
| intron |
310 |
370 |
61 |
| intron |
1693 |
2181 |
489 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_322067 |
AGAP001101-PA [Anopheles gambiae str. PEST] gb|EAA01215.4| AGAP001101-PA [Anopheles gambiae str. PEST] |
1e-167 |
| InterPro |
IPR019819 |
Carboxylesterase type B, conserved site |
|
| InterPro |
IPR019826 |
Carboxylesterase type B, active site |
|
| InterPro |
IPR002018 |
Carboxylesterase, type B |
|
| Pfam |
PF10340.4 |
Protein of unknown function (DUF2424) |
0.23 |
| Pfam |
PF07859.8 |
alpha/beta hydrolase fold |
7e-07 |
| Pfam |
PF12695.2 |
Alpha/beta hydrolase family |
0.02 |
| Pfam |
PF00135.23 |
Carboxylesterase family |
2.1e-133 |
| Pfam |
PF00326.16 |
Prolyl oligopeptidase family |
0.0017 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
| Gene ID |
| Pn.13273 |
| Pn.13274 |
Orthologous genes
| Species |
Gene ID |
| D. plexippus |
DPOGS209671PA |
| S. invicta |
SI2.2.0_14736 |
| M. musculus |
ENSMUSG00000062826 |
| B. mori |
BGIBMGA012585-TA |
| C. quinquefasciatus |
CPIJ007424 |
| P. vanderplanki |
Pv.08213 |
| A. gambiae |
AGAP001101 |
| M. musculus |
ENSMUSG00000031884 |
| M. musculus |
ENSMUSG00000031877 |
| P. vanderplanki |
Pv.04985 |
| A. mellifera |
GB11403-PA |
| M. musculus |
ENSMUSG00000091813 |
| M. musculus |
ENSMUSG00000061825 |
| T. castaneum |
TC014795 |
| P. humanus |
PHUM499800-PA |
| P. vanderplanki |
Pv.07552 |
| P. vanderplanki |
Pv.08214 |
| M. musculus |
ENSMUSG00000055730 |
| N. vitripennis |
NV17362-PA |
| A. aegypti |
AAEL012886 |
| H. melpomene |
HMEL002163-PA |
| D. melanogaster |
FBgn0029690 |
| M. musculus |
ENSMUSG00000031886 |