MidgeBase gene description page [Pn.00077]
Outline
| Gene ID | Pn.00077 |
| Type | Protein coding gene |
| Scaffold | PnScaf166 |
| Start | 11708 |
| End | 12688 |
| Direction | - |
Sequence
Transcript: 915 (bp)
ATGAATTTAATAAGTCTACTTTTCATTCAACTTACAATCGTGATTGTTGTTTTGGGAACGTTGATGAATTTAATAGAAAAATATTTGCCAACAAACATTAAGCAAATGTTCCGTTATGGCAAGCATGCATACAAGGGCGAAGATAGTGATAGACTGGTGAACAAGATAGAAATTCCAAAGGCATGGTTTGCTCACTTCTACGTTTTTGCCGTTCTCTGGACTTGGGCTAGCCTCGCAATGGCAATATCAGTCTATTTCTTCAATTATAAGCCACACGAGTACTTCATCAAATATCTCGACTTCTCATGCGGTGATGATAGACATGCAGAAACATCTCCACTCTTAACACTAACTGCTCTCATTTTGATGACACTTCAATGCACACGAAGATTTATCGAGACGAACTTTCTCCAAATCTTCTCAAAAAAGAGCAAGATAAATTTGACCCACTATTTATGCGGATACCTGCATTATTATGGAGTTTTGGTGCTCATCGTTGCAAAAGCCGAAGGATTTGTTCGAAACCTAGATAGCCCAATTGTGACATTCAAAATATCAGAGATGCTGCGCGTTATCATTTCAACGATGATTTTTGTCTATCTGTGGTACAAGCAATACGAATCCAATATGATTTTTATTAATCTCCGACACACAAAGACGGGAAAAATTGCAACAGAAACTCATTTATTGCCGCGAGGTGGCTGGTTTGAATTGGTTTCGTCACCCCACATGACGAGTGAAGTCGGAATGTATCTTGCCCTTTATGTTGTGCTCTTTCAAAATACATCCTACATTTTTTGCCTTGCATGGGTTGTTTCCAATCAATTTTCAAATGCACTCCTCACTCACCAGTGGTATAAGGAAACATTTTCGGACTATCCGAAAAACAGAAAAGCAATTATTCCTTTTGTAATC
Protein: 305 (aa)
MNLISLLFIQLTIVIVVLGTLMNLIEKYLPTNIKQMFRYGKHAYKGEDSDRLVNKIEIPKAWFAHFYVFAVLWTWASLAMAISVYFFNYKPHEYFIKYLDFSCGDDRHAETSPLLTLTALILMTLQCTRRFIETNFLQIFSKKSKINLTHYLCGYLHYYGVLVLIVAKAEGFVRNLDSPIVTFKISEMLRVIISTMIFVYLWYKQYESNMIFINLRHTKTGKIATETHLLPRGGWFELVSSPHMTSEVGMYLALYVVLFQNTSYIFCLAWVVSNQFSNALLTHQWYKETFSDYPKNRKAIIPFVI
| Type | Start | End | Length |
| CDS |
11711 |
12294 |
584 |
| CDS |
12358 |
12688 |
331 |
| intron |
12295 |
12357 |
63 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_308382 |
AGAP007493-PA [Anopheles gambiae str. PEST] gb|EAA04641.4| AGAP007493-PA [Anopheles gambiae str. PEST] |
1e-83 |
| InterPro |
IPR001104 |
3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal |
|
| Gene Ontology(BP) |
GO:0006629 |
lipid metabolic process |
|
| Gene Ontology(CC) |
GO:0016021 |
integral to membrane |
|
| Gene Ontology(CC) |
GO:0005737 |
cytoplasm |
|
| Gene Ontology(MF) |
GO:0016627 |
oxidoreductase activity, acting on the CH-CH group of donors |
|
| Pfam |
PF02544.11 |
3-oxo-5-alpha-steroid 4-dehydrogenase |
1.4e-21 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| S. invicta |
SI2.2.0_14722 |
| M. musculus |
ENSMUSG00000029233 |
| D. plexippus |
DPOGS202637PA |
| A. mellifera |
GB16793-PA |
| P. humanus |
PHUM087110-PA |
| S. invicta |
SI2.2.0_80703 |
| P. vanderplanki |
Pv.04186 |
| A. gambiae |
AGAP007493 |
| D. melanogaster |
FBgn0032014 |
| H. sapiens |
ENSP00000264228 |
| N. vitripennis |
NV15056-PA |
| A. aegypti |
AAEL012055 |
| T. castaneum |
TC030570 |
| C. quinquefasciatus |
CPIJ008625 |