MidgeBase gene description page [Pn.00076]
Outline
| Gene ID | Pn.00076 |
| Type | Protein coding gene |
| Scaffold | PnScaf166 |
| Start | 10359 |
| End | 11453 |
| Direction | + |
Sequence
Transcript: 993 (bp)
ATGAAAATAGTGAGTAGCATAGTTGTTGCGGTAATAGCCTTTGTTCTTTTATCGGCAGATGTTGAAGGACAGAAAAAGCAAGCGGGCGGTGGAGGAAGCTCCCTAAACGAAAAGGTTCAACAACTGCTCGACTGGAATGCCAAAAAGTCTGTGCTTCGCCTAAATGGAAACAAATTTAAGGAATACGTAAAAAATGCACCAAGAAATTATTCGATAATTGTCATGTTCACAGCACTTCAGCCAGCGCGACAATGTATTATTTGCAGGCCTGCTTCGGACGAATACACCATTCTCGCAAACTCCTACCGCTACTCTTCGGCCTATTCCAACAGACTTTTCTTTGCAATGGTCGATTTCGATGAAGGATCTGATGTTTTTCAGATGCTTCGACTTAACACGGCTCCCGTTTTCATGCACTTCCCAGCGAAGGGTAAGGCAAAGGGCAGCGATACAATGGACATTCAACGTGTAGGCATCTCCGCAGAAGCAATTGCAAAGTGGGTGCAGGAACGTACGGACGTTCAAATTAGAATTTTCAGACCGCCAAACTACTCAGGCACGGTTGCCGTCATTATGCTGATTGCATTCGTTGGCGGCTTCTTGTATTTGAAGAGAAACAACTTGGAGTTTTTGCAAAACAAACAACTTTGGGGATTGATGGCAGTATTATTCACCTTTGCGATGATTTCCGGCCAAATGTGGAACCATATCCGCTCACCACCGTTCGTACACAAGAGCCAAAATGGAGGCGTTTCCTATTTCCACGGCTCATCGCAAGGACAACTCGTATTCGAGACCTATATTGTCATGGTCTTGAATGCATTAGTTGTCGTAGGAATGATTCTTTTAACGGAATCTGGCAGTCAGAATGATACACGCAAAGGAAAACTGATGGCAATTGTTGGGCTCGTCTTTGTAGCCGTGTTCTTCTCCCTCCTTTTATCTGCTTTCCGATCAAAGGCTCATGGCTACCCGTATTCATTCTTATTCAAG
Protein: 331 (aa)
MKIVSSIVVAVIAFVLLSADVEGQKKQAGGGGSSLNEKVQQLLDWNAKKSVLRLNGNKFKEYVKNAPRNYSIIVMFTALQPARQCIICRPASDEYTILANSYRYSSAYSNRLFFAMVDFDEGSDVFQMLRLNTAPVFMHFPAKGKAKGSDTMDIQRVGISAEAIAKWVQERTDVQIRIFRPPNYSGTVAVIMLIAFVGGFLYLKRNNLEFLQNKQLWGLMAVLFTFAMISGQMWNHIRSPPFVHKSQNGGVSYFHGSSQGQLVFETYIVMVLNALVVVGMILLTESGSQNDTRKGKLMAIVGLVFVAVFFSLLLSAFRSKAHGYPYSFLFK
| Type | Start | End | Length |
| CDS |
10359 |
10442 |
84 |
| CDS |
10542 |
11450 |
909 |
| intron |
10443 |
10541 |
99 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_001650913 |
hypothetical protein AaeL_AAEL005457 [Aedes aegypti] gb|EAT43075.1| conserved hypothetical protein [Aedes aegypti] |
1e-147 |
| InterPro |
IPR006844 |
Magnesium transporter protein 1 |
|
| InterPro |
IPR012336 |
Thioredoxin-like fold |
|
| InterPro |
IPR021149 |
Oligosaccharyl transferase complex, subunit OST3/OST6 |
|
| Pfam |
PF13567.1 |
Domain of unknown function (DUF4131) |
0.015 |
| Pfam |
PF00032.12 |
Cytochrome b(C-terminal)/b6/petD |
0.18 |
| Pfam |
PF00335.15 |
Tetraspanin family |
1.5 |
| Pfam |
PF05545.6 |
Cbb3-type cytochrome oxidase component FixQ |
7.4 |
| Pfam |
PF06197.8 |
Protein of unknown function (DUF998) |
1.1 |
| Pfam |
PF01957.13 |
NfeD-like C-terminal, partner-binding |
0.71 |
| Pfam |
PF04756.8 |
OST3 / OST6 family |
5.1e-47 |
| Pfam |
PF11862.3 |
Domain of unknown function (DUF3382) |
0.51 |
| Pfam |
PF04893.12 |
Yip1 domain |
0.066 |
| Pfam |
PF00085.15 |
Thioredoxin |
0.0002 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. sapiens |
ENSP00000426880 |
| H. sapiens |
ENSP00000426973 |
| M. musculus |
ENSMUSG00000039530 |
| M. musculus |
ENSMUSG00000031232 |
| A. gambiae |
AGAP010010 |
| A. mellifera |
GB18604-PA |
| T. castaneum |
TC007206 |
| H. sapiens |
ENSP00000371450 |
| D. plexippus |
DPOGS202680PA |
| A. aegypti |
AAEL005457 |
| H. sapiens |
ENSP00000221167 |
| H. sapiens |
ENSP00000423426 |
| B. mori |
BGIBMGA001303-TA |
| H. sapiens |
ENSP00000420829 |
| H. sapiens |
ENSP00000354649 |
| D. melanogaster |
FBgn0032015 |
| N. vitripennis |
NV15057-PA |
| H. sapiens |
ENSP00000425777 |
| C. quinquefasciatus |
CPIJ005611 |
| S. invicta |
SI2.2.0_00137 |
| H. sapiens |
ENSP00000424544 |
| P. vanderplanki |
Pv.04185 |
| A. mellifera |
GB12640-PA |
| P. humanus |
PHUM087120-PA |