MidgeBase gene description page [Pn.00056]
Outline
| Gene ID | Pn.00056 |
| Type | Protein coding gene |
| Scaffold | PnScaf121 |
| Start | 61017 |
| End | 62028 |
| Direction | + |
Sequence
Transcript: 909 (bp)
ATGGACGACACATTTGTTTTAATATTACTCGTTATTTTGATGCTCGTTGGCTCATATTTTGCGGGAATGATTCCATTAGTCTTTAATCTGTCTGAGGCTAAACTAAAAATCGTATCAATACTTGGAGCTGGACTACTCGTAGGTACAGCTTTAATTGTAATCATTCCGGAAGGAGTTCGCTCGCTATATGCAAATGAAAAGGTCGAAAACAGGGCTGAAGTTGGAACAGAGCAAAATAATCACCATCACGATGAACCAGAAGATTATTCCAAGACAATCGGACTGTCATTAGTATTAGGATTCGTTTTTATGATGCTCGTTGAGCAAATCTCGTCAAGACATACGCACAATTCCGATGGAAAGGACGTTAAAAGAAACCCGACAGCTACGATTGGATTAGTTGTTCATGCAGCAGCTGATGGCATCGCTCTTGGAGCAGCAGCCAAAACTAGTCACCAAGACGTAGAAATGATAGTATTTCTCGCAATCATGCTTCATAAAGCTCCAGCTGCATTTGGTCTTGTGAGCTTTTTACTTCACGAAGGAATCGAACGCCAGCGCATTAGAAAACATTTGGGAATATTTTCATTATCTGCGCCTTTGTTAACACTAATCACTTATTTTGGAATTGCTCAAGAACAGAAAGAAACGCTAAATTCTGTTAACGCTACAGCTGTTGCCATGCTGTTTTCAGCTGGTACTTTTCTGTATGTCGCAACAGTTCACGTTTTGCCAGAATTGACACATCAGCAACCACATTTCCATCATGCGTCTTCGGGTCCACATTATAGTCACCTTGAACAAGGAACGCCAAGCTCAAAGCCTCAGAACGGACTTACTAATGTGGAACTACTTACTCTTATTTCTGGTGCACTTCTGCCGCTTTTTCTAACAATTGGGCATCATCAC
Protein: 303 (aa)
MDDTFVLILLVILMLVGSYFAGMIPLVFNLSEAKLKIVSILGAGLLVGTALIVIIPEGVRSLYANEKVENRAEVGTEQNNHHHDEPEDYSKTIGLSLVLGFVFMMLVEQISSRHTHNSDGKDVKRNPTATIGLVVHAAADGIALGAAAKTSHQDVEMIVFLAIMLHKAPAAFGLVSFLLHEGIERQRIRKHLGIFSLSAPLLTLITYFGIAQEQKETLNSVNATAVAMLFSAGTFLYVATVHVLPELTHQQPHFHHASSGPHYSHLEQGTPSSKPQNGLTNVELLTLISGALLPLFLTIGHHH
| Type | Start | End | Length |
| CDS |
61017 |
61112 |
96 |
| CDS |
61213 |
62025 |
813 |
| intron |
61113 |
61212 |
100 |
Auto annotation result
| Program/Analysis | Accession | Description | Score/Expectation |
| BLASTP/NCBI-nr |
XP_002059754 |
GJ16326 [Drosophila virilis] gb|EDW71152.1| GJ16326 [Drosophila virilis] gb|ACY70501.1| hypothetical protein DVIR88_6g0038 [Drosophila virilis] |
1e-104 |
| InterPro |
IPR003689 |
Zinc/iron permease |
|
| Gene Ontology(BP) |
GO:0055085 |
transmembrane transport |
|
| Gene Ontology(BP) |
GO:0030001 |
metal ion transport |
|
| Gene Ontology(CC) |
GO:0016020 |
membrane |
|
| Gene Ontology(MF) |
GO:0046873 |
metal ion transmembrane transporter activity |
|
| Pfam |
PF02535.17 |
ZIP Zinc transporter |
4.5e-42 |
| Pfam |
PF02293.10 |
AmiS/UreI family transporter |
0.11 |
| Pfam |
PF13346.1 |
ABC-2 family transporter protein |
7.9e-06 |
| Pfam |
PF01757.17 |
Acyltransferase family |
0.12 |
Expression level (RPKM)
Paralog/Ortholog genes
Paralogous genes
Orthologous genes
| Species |
Gene ID |
| H. sapiens |
ENSP00000336887 |
| N. vitripennis |
NV10062-PA |
| C. quinquefasciatus |
CPIJ018637 |
| A. aegypti |
AAEL007959 |
| A. gambiae |
AGAP009188 |
| P. vanderplanki |
Pv.01459 |
| D. melanogaster |
FBgn0039902 |
| H. sapiens |
ENSP00000450639 |
| H. melpomene |
HMEL014880-PA |
| T. castaneum |
TC015133 |
| S. invicta |
SI2.2.0_08894 |
| D. plexippus |
DPOGS203094PA |
| H. sapiens |
ENSP00000451833 |
| P. humanus |
PHUM557340-PA |
| B. mori |
BGIBMGA011127-TA |
| M. musculus |
ENSMUSG00000048833 |
| A. mellifera |
GB14688-PA |